spdep/ 0000755 0001751 0000144 00000000000 13034647303 011406 5 ustar hornik users spdep/inst/ 0000755 0001751 0000144 00000000000 12770451462 012370 5 ustar hornik users spdep/inst/CITATION 0000644 0001751 0000144 00000002756 12456023776 013543 0 ustar hornik users citHeader("To cite spdep in publications use:")
citEntry(entry = "Article",
title = "Comparing Implementations of Estimation Methods for Spatial Econometrics",
author = personList(as.person("Roger Bivand"),
as.person("Gianfranco Piras")),
journal = "Journal of Statistical Software",
year = "2015",
volume = "63",
number = "18",
pages = "1--36",
url = "http://www.jstatsoft.org/v63/i18/",
textVersion =
paste("Roger Bivand, Gianfranco Piras (2015).",
"Comparing Implementations of Estimation Methods for Spatial Econometrics.",
"Journal of Statistical Software, 63(18), 1-36.",
"URL http://www.jstatsoft.org/v63/i18/.")
)
citEntry(entry = "Article",
title = "Computing the Jacobian in Gaussian spatial autoregressive models: An illustrated comparison of available methods",
author = personList(as.person("Roger Bivand"),
as.person("Jan Hauke"),
as.person("Tomasz Kossowski")),
journal = "Geographical Analysis",
year = "2013",
volume = "45",
number = "2",
pages = "150--179",
url = "http://www.jstatsoft.org/v63/i18/",
textVersion =
paste("Bivand, R. S., Hauke, J., and Kossowski, T. (2013).",
"Computing the Jacobian in Gaussian spatial autoregressive models:",
"An illustrated comparison of available methods. Geographical",
"Analysis, 45(2), 150-179.")
)
spdep/inst/README 0000644 0001751 0000144 00000011031 12723257757 013255 0 ustar hornik users Spatial dependence: weighting schemes, statistics and models
A collection of functions to create spatial weights matrix objects from
polygon contiguities, from point patterns by distance and tesselations,
for summarising these objects, and for permitting their use in spatial
data analysis; a collection of tests for spatial autocorrelation,
including global Moran's I, Geary's C, Hubert/Mantel general cross product
statistic, Empirical Bayes estimates and spatial Index, and Getis/Ord G,
local Moran's I and Getis/Ord G, saddlepoint approximations for global
and local Moran's I; and functions for estimating spatial simultaneous
autoregressive (SAR) lag and error models, weighted and unweighted
SAR and CAR spatial regression models, and GM SAR error models.
This file is intended to clarify ownership and copyright: where
possible individual files also carry brief copyright notices.
Copyrights
==========
Files: src/dnn.c and src/knearneigh.c are based on code taken from:
class/class.c by W. N. Venables and B. D. Ripley Copyright (C) 1994-9
Files: src/dfs_comp.c, src/gabriel.c, src/relative.c, R/components.R,
R/gabrielneigh.R, R/graph2nb.R, R/nboperations.R, R/relneigh.R, R/soi.R,
man/compon.Rd, man/graphneigh.Rd, man/nboperations.Rd are copyright (c)
2001 by Nicholas Lewin-Koh and are subject to the licence at the foot
of this file.
File: R/lag.spsarlm.R is copyright (c) 1998-2002 by Roger Bivand and Andrew
Bernat, and is subject to the licence at the foot of this file.
File: R/globalG.R is copyright (c) 2002 by Hisaji ONO and Roger Bivand,
and is subject to the licence at the foot of this file.
Files: R/mtlocalmoran.R and R/mtmoran.R are copyright (c) 2002 by Roger
Bivand and Michael Tiefelsdorf, and are subject to the licence at the
foot of this file.
File: R/EBI.R is copyright (c) 2003 by Roger Bivand and Marilio Carvalho,
and is subject to the licence at the foot of this file.
File: R/p.adjustSP.R is copyright (c) 2004 by Roger Bivand and Danlin Yu,
and is subject to the licence at the foot of this file.
File: R/autocov.R is copyright (c) 2005 by Carsten F. Dormann and Roger Bivand,
and is subject to the licence at the foot of this file.
File: R/kpgm_new.R is copyright (c) 2005 by Luc Anselin and Roger Bivand,
and is subject to the licence at the foot of this file.
File: R/SpatialFiltering.R is copyright (c) 2005 by Yongwan Chun, Michael
Tiefelsdorf and Roger Bivand, and is subject to the licence at the foot
of this file.
Files: data/afcon.rda, data/columbus.rda, data/oldcon.rda,
data/nc.sids.rda are derived by permission from SpaceStat data files
prepared by Luc Anselin; they were downloaded from:
http://www.spacestat.com/data.htm#data
under the following conditions: "All data sets are provided as is,
and no warranties, expressed or implied are made as to the correctness
and fitness for a purpose. Proper citation of the source of the data in
published work would be appreciated."
File: data/eire.rda is derived from data sets made available by Michael
Tiefelsdorf based on sources named in man/eire.Rd, and downloaded from:
http://geog-www.sbs.ohio-state.edu/faculty/tiefelsdorf/GeoStat.htm
File: data/auckland.rda is derived from data sets included with INFOMAP
in Bailey T, Gatrell A (1995) Interactive Spatial Data Analysis, Harlow:
Longman, and is used with permission of the authors.
File: data/NY_data.rda is derived from data sets for Waller, L. and
C. Gotway (2004) Applied Spatial Statistics for Public Health Data,
New York: John Wiley and Sons, and is used with permission of the authors.
Other files in the data directory are derived from sources given on
their help pages.
All other files are copyright (c) 1998-2005 Roger S. Bivand and
are subject to the licence at the foot of this file.
Licence
=======
This is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
The file COPYING in the R top-level directory is a copy of the "GNU
General Public License".
Roger.Bivand@nhh.no
spdep/inst/ChangeLog 0000644 0001751 0000144 00000300235 13034515052 014133 0 ustar hornik users 2016-12-20 14:54 rsbivand
* man/bhicv.Rd: tidy
2016-12-09 07:53 rsbivand
* DESCRIPTION, src/dnn.c: gcdists bug fixed
2016-09-21 07:56 rsbivand
* man/COL.OLD.Rd: tidy
2016-09-21 07:50 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2016-09-21 07:49 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2016-09-21 07:48 rsbivand
* man/baltimore.Rd, man/columbus.Rd, man/nc.sids.Rd,
man/read.gal.Rd, man/read.gwt2nb.Rd: tidy
2016-09-21 07:10 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2016-09-21 07:09 rsbivand
* DESCRIPTION, R/error.spsarlm.R, man/errorsarlm.Rd: drop bug fix
in lmSLX
2016-08-23 15:29 rsbivand
* man/COL.OLD.Rd, man/baltimore.Rd, man/columbus.Rd,
man/nc.sids.Rd, man/read.gal.Rd, man/read.gwt2nb.Rd: asu links to
chicago
2016-08-23 12:52 rsbivand
* DESCRIPTION, R/knearneigh.R, R/nb2blocknb.R: nb2blocknb and
knearneigh fixes
2016-07-29 19:44 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2016-07-29 19:42 rsbivand
* DESCRIPTION: tidy
2016-06-21 11:43 rsbivand
* R/lm.LMtests.R: tidy
2016-06-20 11:27 rsbivand
* DESCRIPTION, NAMESPACE, R/jacobian.R, R/lag.spsarlm.R,
R/spBreg.R, data/elect80.rda, man/impacts.sarlm.Rd,
man/lagsarlm.Rd: adding Bayesian lag model
2016-06-17 19:14 rsbivand
* R/error.spsarlm.R, R/sarlm.R: add impacts and predict methods for
SLX
2016-06-17 10:12 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R, R/impacts.R,
man/errorsarlm.Rd, man/impacts.sarlm.Rd, man/predict.sarlm.Rd:
add impacts and predict methods for SLX
2016-05-31 16:27 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2016-05-31 16:25 rsbivand
* man/graphneigh.Rd, vignettes/nb.Rnw: remove questioned C code
2016-05-31 10:07 rsbivand
* R/soi.R, src/init.c, src/spdep.h: remove questioned C code
2016-05-31 09:59 rsbivand
* DESCRIPTION, R/knearneigh.R, R/soi.R, inst/README,
man/graphneigh.Rd, src/soigraph.c: remove questioned C code
2016-04-12 09:22 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2016-04-12 09:13 rsbivand
* DESCRIPTION, R/listw2sn.R, man/tri2nb.Rd: bug fix in sn2listw
affecting tri2nb
2016-04-04 17:01 rsbivand
* src/soigraph.c: add verbatim copyright to soigraph.c
2016-03-18 07:52 rsbivand
* R/error.spsarlm.R, man/errorsarlm.Rd: SLX/SDEM impacts
2016-03-17 13:26 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R: SLX/SDEM impacts
2016-03-14 13:09 rsbivand
* man/predict.sarlm.Rd: add weights in Hausman
2016-03-14 12:39 rsbivand
* man/MCMCsamp.Rd: add weights in Hausman
2016-03-14 10:43 rsbivand
* R/error.spsarlm.R: add weights in Hausman
2016-03-13 21:07 rsbivand
* DESCRIPTION, R/error.hessian.R, R/error.spsarlm.R, R/mcmcsamp.R,
R/spautolm.R, man/errorsarlm.Rd: add weights to errorsarlm
2016-02-22 10:14 rsbivand
* DESCRIPTION, R/EBI.R, man/EBImoran.mc.Rd: change mean subtraction
default in EBI
2016-02-11 19:48 rsbivand
* R/impacts.R: add null check to tp in print.summary.lagImpact
2016-02-08 16:05 rsbivand
* R/jacobian.R: tidy
2016-02-07 20:20 rsbivand
* DESCRIPTION, NAMESPACE, R/impacts.R, man/impacts.sarlm.Rd:
spBreg_lag working
2016-02-03 17:29 rsbivand
* DESCRIPTION, R/jacobian.R, man/boston.Rd: tidy
2016-01-01 18:52 rsbivand
* DESCRIPTION, R/sarlm.R, man/invIrM.Rd, man/predict.sarlm.Rd:
Martin Gubri end of year edits
2015-12-22 09:54 rsbivand
* DESCRIPTION: tidy
2015-12-21 17:35 rsbivand
* ChangeLog, inst/ChangeLog, man/boston.Rd: tidy
2015-12-10 12:30 rsbivand
* ChangeLog, man/localmoran.Rd, man/localmoran.sad.Rd,
man/nb2blocknb.Rd: Morans I archaeology
2015-10-21 13:24 rsbivand
* R/summary.spsarlm.R, man/lm.morantest.exact.Rd: tidy
2015-10-05 20:36 rsbivand
* man/localmoran.sad.Rd: use Omega= argument in localmoran.sad
2015-09-17 13:21 rsbivand
* R/sarlm.R: fix in predict.sarlm()
2015-09-15 10:14 rsbivand
* DESCRIPTION: tidy
2015-09-13 17:00 rsbivand
* DESCRIPTION, R/nb2mat.R, R/sarlm.R, man/invIrM.Rd,
man/predict.sarlm.Rd: adding preliminary GSoC 2015 results
2015-09-05 14:55 rsbivand
* DESCRIPTION, R/impacts.R: add sac to listw impacts
2015-08-26 22:18 gpiras
* DESCRIPTION: fix description file
2015-06-28 21:40 rsbivand
* DESCRIPTION, NAMESPACE: CRAN
_R_CHECK_CODE_USAGE_WITH_ONLY_BASE_ATTACHED_=true NAMESPACE tidy
2015-05-21 07:32 rsbivand
* R/error.spsarlm.R: fix index error in create_WX
2015-05-07 15:56 rsbivand
* R/mcmcsamp.R: model.reponse as.is issue
2015-05-06 19:07 rsbivand
* R/lm.morantest.R, R/moran.exact.R, R/mtlocalmoran.R, R/mtmoran.R:
Moran's I to Moran I
2015-05-06 18:12 rsbivand
* DESCRIPTION, R/geary.R, R/moran.R, man/dnearneigh.Rd,
man/eire.Rd, man/house.Rd, man/knearneigh.Rd,
man/lm.morantest.exact.Rd, man/lm.morantest.sad.Rd,
man/localmoran.exact.Rd, man/localmoran.sad.Rd: further +ellps=
corrections
2015-03-25 20:59 rsbivand
* R/lag.spsarlm.R, R/sacsarlm.R: fix spam bug in sacsarlm
2015-03-24 08:40 rsbivand
* DESCRIPTION, R/EBI.R, man/EBImoran.mc.Rd: EBI subtract mean
2015-03-17 13:12 rsbivand
* man/eigenw.Rd: arpack bounds issue
2015-03-17 10:33 rsbivand
* man/lextrB.Rd, vignettes/nb_igraph.Rmd: arpack bounds issue
2015-03-16 21:23 rsbivand
* DESCRIPTION, R/lextrW.R: fix for no-neighbour lextrW
2015-03-16 07:43 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2015-03-16 07:42 rsbivand
* DESCRIPTION, R/lextrB.R, R/lextrW.R: condition on R version for
.lm.fit()
2015-03-15 13:34 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2015-03-13 10:12 rsbivand
* R/lag.spsarlm.R, R/sacsarlm.R: alleviate tol.solve issue in
*sarlm
2015-03-13 10:11 rsbivand
* R/localmoran.exact.R, R/moran.exact.R: fix localmoran.exact
two.sided
2015-03-12 15:29 rsbivand
* R/lag.spsarlm.R, R/sacsarlm.R: adding divert to fdHess for lag
and sac
2015-03-12 11:59 rsbivand
* R/error.spsarlm.R, R/jacobian_setup.R, vignettes/CO69.Rnw:
alleviate tol.solve issue in errorsarlm
2015-03-08 18:53 rsbivand
* NAMESPACE, R/lextrB.R, R/lextrW.R, man/lextrB.Rd, src/eminmaxC.c,
src/init.c, src/spdep.h: S style extreme eigenvalues
2015-03-06 12:32 rsbivand
* R/lextrB.R, R/lextrW.R, data/oldcol.rda, man/COL.OLD.Rd,
man/lextrB.Rd, man/lm.morantest.Rd, src/eminmaxC.c: disambiguate
AREA in oldcol
2015-03-02 18:35 rsbivand
* man/lextrB.Rd: adding extreme eigs for W
2015-03-01 19:51 rsbivand
* DESCRIPTION, NAMESPACE, R/lextrB.R, R/lextrW.R, src/eminmaxC.c,
src/init.c, src/spdep.h: adding extreme eigs for W
2015-02-17 21:06 rsbivand
* NAMESPACE, R/lextrB.R, man/lextrB.Rd: checks on input weights
2015-02-17 10:22 rsbivand
* R/lextrB.R: max mustBeB
2015-02-16 21:33 rsbivand
* DESCRIPTION, NAMESPACE, R/lextrB.R, man/lextrB.Rd,
src/eminmaxC.c, src/init.c, src/spdep.h: adding extreme
eigenvalue code
2015-02-04 09:12 rsbivand
* DESCRIPTION, NAMESPACE, man/COL.OLD.Rd, man/NY_data.Rd,
man/baltimore.Rd, man/boston.Rd, man/columbus.Rd, man/eire.Rd,
man/nc.sids.Rd, man/read.gal.Rd, man/read.gwt2nb.Rd,
man/wheat.Rd: fix dead URLs
2015-01-27 13:11 rsbivand
* vignettes/nb_igraph.Rmd: tidy
2015-01-27 09:00 rsbivand
* R/autocov.R, man/autocov_dist.Rd: update autocov_dist to Bardos
et al. (2015)
2015-01-25 19:31 rsbivand
* R/utils.R: tidy
2015-01-25 18:14 rsbivand
* vignettes/nb_igraph.Rmd: tidy
2015-01-20 10:39 rsbivand
* man/graphneigh.Rd: gabrielneigh issue
2015-01-18 17:42 rsbivand
* DESCRIPTION, vignettes/nb_igraph.Rmd: tidy
2015-01-18 14:21 rsbivand
* DESCRIPTION, vignettes/nb_igraph.Rmd: Matrix all.equal problem
2015-01-16 14:20 rsbivand
* inst/ChangeLog: tidy
2015-01-16 14:19 rsbivand
* ChangeLog: tidy
2015-01-16 14:04 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2015-01-15 21:05 rsbivand
* DESCRIPTION, R/AAA.R, R/spChkOption.R, R/utils.R, inst/CITATION,
man/GMerrorsar.Rd, man/do_ldet.Rd, man/errorsarlm.Rd,
man/gstsls.Rd, man/impacts.sarlm.Rd, man/lagsarlm.Rd,
man/sacsarlm.Rd, man/set.spChkOption.Rd, man/stsls.Rd: add JSS
2015 reference
2015-01-07 11:41 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2015-01-07 11:39 rsbivand
* DESCRIPTION, R/jacobian.R, man/errorsarlm.Rd: tidy
2015-01-07 09:55 rsbivand
* man/eigenw.Rd, vignettes/nb_igraph.Rmd: shield igraph::arpack
2015-01-07 09:30 rsbivand
* R/moran.R, man/moran.mc.Rd: moran.mc adjust.n=
2015-01-06 17:02 rsbivand
* DESCRIPTION, R/jacobian.R, R/jacobian_setup.R, R/utils.R,
man/errorsarlm.Rd, src/dnn.c, src/insiders.c, src/nbdists.c: spam
update issues
2015-01-05 21:22 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2015-01-05 21:21 rsbivand
* ChangeLog, DESCRIPTION: tidy
2015-01-05 21:19 rsbivand
* man/errorsarlm.Rd: tidy
2015-01-05 13:20 rsbivand
* man/errorsarlm.Rd, vignettes/nb_igraph.Rmd: try in Matrix_J
donttest
2015-01-05 09:41 rsbivand
* vignettes/nb_igraph.Rmd: tidy
2014-12-28 18:59 rsbivand
* vignettes/nb_igraph.Rmd: igraph usage
2014-12-28 18:28 rsbivand
* vignettes/nb_igraph.Rmd: igraph usage
2014-12-28 13:25 rsbivand
* vignettes/nb_igraph.Rmd: igraph usage
2014-12-26 20:04 rsbivand
* vignettes/nb_igraph.Rmd: igraph usage
2014-12-23 22:22 rsbivand
* vignettes/nb_igraph.Rmd: igraph usage
2014-12-22 23:14 rsbivand
* vignettes/nb_igraph.Rmd: igraph usage
2014-12-22 22:54 rsbivand
* man/aple.mc.Rd, man/set.mcOption.Rd, man/skater.Rd, man/trW.Rd:
fixed detectCores in examples
2014-12-22 17:32 rsbivand
* R/globalG.R, man/globalG.test.Rd, vignettes/nb_igraph.Rmd: igraph
vignette start
2014-12-19 21:17 rsbivand
* R/eigenw.R, vignettes/nb_igraph.Rmd: igraph vignette start
2014-12-19 15:09 rsbivand
* vignettes/nb_igraph.Rmd: tidy
2014-12-18 21:55 rsbivand
* R/listw2sn.R, R/nb2mat.R, vignettes/nb_igraph.Rmd: igraph
vignette start
2014-12-18 13:51 rsbivand
* vignettes/nb_igraph.Rmd: igraph vignette start
2014-12-18 13:48 rsbivand
* DESCRIPTION, R/jacobian.R, R/listw2Matrix.R, R/nb2mat.R,
man/as_dgRMatrix_listw.Rd, vignettes/nb_igraph.Rmd: igraph
vignette start
2014-12-16 20:37 rsbivand
* vignettes/nb_igraph.Rmd: igraph vignette start
2014-12-16 20:35 rsbivand
* DESCRIPTION, vignettes/nb_igraph.Rmd: igraph vignette start
2014-12-15 09:32 rsbivand
* man/nblag.Rd: start introducing igraph
2014-12-12 23:18 rsbivand
* DESCRIPTION, R/listw2Matrix.R, man/compon.Rd, man/eigenw.Rd:
start introducing igraph
2014-12-09 16:45 rsbivand
* R/listw2Matrix.R, man/as_dgRMatrix_listw.Rd, man/trW.Rd: coerce
to CsparseMatrix
2014-12-08 13:13 rsbivand
* DESCRIPTION, NAMESPACE, R/ME.R, R/aple.R, R/error.spsarlm.R,
R/jacobian.R, R/kpgm_new.R, R/lee.test.R, R/listw2Matrix.R,
R/mcmcsamp.R, R/mess.R, R/nb2listw.R, R/sarlm.R, R/spautolm.R,
man/as_dgRMatrix_listw.Rd, man/eigenw.Rd, man/errorsarlm.Rd,
man/gstsls.Rd, man/house.Rd, man/impacts.sarlm.Rd, man/invIrM.Rd,
man/lagsarlm.Rd, man/mat2listw.Rd, man/sacsarlm.Rd, man/trW.Rd:
coerce to CsparseMatrix
2014-12-02 23:01 rsbivand
* R/edit.nb.R, R/nb2blocknb.R, R/spautolm.R, man/boston.Rd,
man/edit.nb.Rd, man/house.Rd, man/impacts.sarlm.Rd,
man/spautolm.Rd: dontrun tidy
2014-12-02 12:34 rsbivand
* ChangeLog, inst/ChangeLog: tidt
2014-12-02 12:32 rsbivand
* DESCRIPTION, R/globalG.R, R/read.gal.R, src/card.c,
src/nbdists.c, vignettes/sids.Rnw: read.gal() not assigning 0 to
nb object
2014-11-27 10:38 rsbivand
* man/spautolm.Rd: spautolm docs
2014-11-21 08:43 rsbivand
* DESCRIPTION, R/globalG.R, man/globalG.test.Rd: globalG two.sided
2014-11-06 13:43 rsbivand
* DESCRIPTION, R/jacobian.R, R/knearneigh.R, R/listw2sn.R,
R/nb2listw.R: formula and requireNamespace
2014-11-06 12:28 rsbivand
* DESCRIPTION, R/SpatialFiltering.R, R/aple.mc.R,
R/error.spsarlm.R, R/impacts.R, R/jacobian.R, R/knearneigh.R,
R/kpgm_new.R, R/lag.spsarlm.R, R/listw2sn.R, R/mess.R,
R/nb2listw.R, R/nbcosts.R, R/prunecost.R, R/s2sls.R,
R/sacsarlm.R: formula and requireNamespace
2014-09-17 19:31 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2014-08-31 21:34 rsbivand
* R/tri2nb.R: allow other bounds in dnn
2014-08-31 14:57 rsbivand
* DESCRIPTION, R/dnearneigh.R, man/dnearneigh.Rd,
man/summary.nb.Rd, src/dnn.c: allow other bounds in dnn
2014-07-30 15:14 rsbivand
* R/bptest.sarlm.R, src/soigraph.c: Debian copyright issue
2014-07-18 12:23 rsbivand
* DESCRIPTION, NAMESPACE, man/do_ldet.Rd, man/nb2listw.Rd:
exporting can.be.simmed and jacobianSetup
2014-06-05 19:08 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2014-06-05 18:59 rsbivand
* DESCRIPTION, man/nb2listw.Rd: tidy
2014-05-15 10:39 rsbivand
* R/impacts.R, man/impacts.sarlm.Rd: slacken row-standardised
condition on listw impacts
2014-04-19 16:54 rsbivand
* DESCRIPTION, NAMESPACE, R/lee.R, R/lee.mc.R, R/lee.test.R,
R/lee_internal.R, man/lee.Rd, man/lee.mc.Rd, man/lee.test.Rd:
adding Lee test
2014-04-03 18:25 rsbivand
* ChangeLog, DESCRIPTION, NAMESPACE, R/error.spsarlm.R,
R/lag.spsarlm.R, R/sacsarlm.R, man/errorsarlm.Rd: exposing
create_WX
2014-03-21 12:49 rsbivand
* DESCRIPTION, R/dnearneigh.R, man/dnearneigh.Rd: logic bug in
dnearneighbour
2014-03-19 07:56 rsbivand
* DESCRIPTION, man/errorsarlm.Rd, man/lagsarlm.Rd, man/sacsarlm.Rd:
sarlm help pages links
2014-03-05 09:26 rsbivand
* DESCRIPTION, R/impacts.R, man/impacts.sarlm.Rd: fix holes in
listw route to impacts
2014-03-04 14:41 rsbivand
* DESCRIPTION, R/impacts.R, R/nb2mat.R: fix holes in listw route to
impacts
2014-01-31 14:08 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2014-01-31 14:07 rsbivand
* man/EBImoran.mc.Rd, man/bptest.sarlm.Rd, man/eire.Rd: now UTF-8
2014-01-31 12:34 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2014-01-31 12:33 rsbivand
* DESCRIPTION, NAMESPACE, man/EBImoran.mc.Rd, man/bptest.sarlm.Rd,
man/eire.Rd: all to UTF-8
2014-01-31 09:40 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2014-01-31 09:39 rsbivand
* man/boston.Rd: decription of Boston tracts
2014-01-31 09:30 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2014-01-31 09:28 rsbivand
* man/boston.Rd: decription of Boston tracts
2014-01-30 20:16 rsbivand
* inst/ChangeLog: tidy
2014-01-30 20:15 rsbivand
* ChangeLog: tidy
2014-01-30 20:12 rsbivand
* DESCRIPTION, inst/etc/shapes/boston_tracts.dbf,
inst/etc/shapes/boston_tracts.prj,
inst/etc/shapes/boston_tracts.shp,
inst/etc/shapes/boston_tracts.shx, man/boston.Rd: adding boston
tract polygons
2014-01-17 12:48 rsbivand
* DESCRIPTION, R/knearneigh.R, man/knearneigh.Rd: duplicate points
in knearneigh
2014-01-13 10:38 rsbivand
* data/wheat.rda, data/wheat.txt, inst/etc/shapes/wheat.dbf,
man/wheat.Rd: bug in wheat data
2013-12-04 21:33 rsbivand
* DESCRIPTION, R/nb2blocknb.R, man/nb2blocknb.Rd: NULL nb in
nb2blocknb
2013-11-05 10:43 rsbivand
* DESCRIPTION, R/spautolm.R: fix non-fdHess se in spautolm
2013-10-29 18:13 rsbivand
* DESCRIPTION: socket cluster for skater
2013-10-29 18:10 rsbivand
* ChangeLog, inst/ChangeLog: socket cluster for skater
2013-10-29 18:09 rsbivand
* DESCRIPTION, R/nbcosts.R, R/prunecost.R: socket cluster for
skater
2013-10-27 10:21 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-10-27 10:19 rsbivand
* NAMESPACE, man/impacts.sarlm.Rd: adding intImpacts to namespace
2013-10-22 06:13 rsbivand
* DESCRIPTION, R/error.spsarlm.R, man/errorsarlm.Rd: fix lmSLX bug
2013-10-20 07:41 rsbivand
* R/nbcosts.R, R/prunecost.R, man/nbcosts.Rd, man/skater.Rd: mc
options
2013-10-18 16:30 rsbivand
* R/impacts.R, man/trW.Rd: mc options
2013-10-18 06:43 rsbivand
* R/spChkOption.R, man/set.mcOption.Rd: mc options
2013-10-17 21:22 rsbivand
* NAMESPACE, R/EBI.R, R/ME.R, R/aple.mc.R, R/geary.R, R/moran.R,
R/sp.mantel.R, R/spChkOption.R, man/set.mcOption.Rd: mc options
2013-10-17 20:21 rsbivand
* DESCRIPTION, R/aple.mc.R, R/spChkOption.R, man/aple.Rd,
man/aple.mc.Rd, man/set.mcOption.Rd: mc options
2013-10-17 12:10 rsbivand
* R/AAA.R, R/spChkOption.R, man/set.mcOption.Rd: mc options
2013-10-01 18:32 rsbivand
* R/error.spsarlm.R: series approximation issue
2013-10-01 11:01 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/nb2mat.R, man/invIrM.Rd: series
approximation issue
2013-09-20 16:40 rsbivand
* man/set.mcOption.Rd: progress on parallel integration
2013-09-20 10:43 rsbivand
* DESCRIPTION, NAMESPACE, R/AAA.R, R/aple.mc.R, R/spChkOption.R,
man/aple.mc.Rd, man/set.spChkOption.Rd: progress on parallel
integration
2013-09-17 08:13 rsbivand
* R/nbcosts.R, R/prunecost.R: crossplatform skater functions
2013-09-16 08:40 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-09-16 08:39 rsbivand
* man/droplinks.Rd, man/errorsarlm.Rd: tidy
2013-09-16 08:26 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-09-13 09:04 rsbivand
* R/knearneigh.R: fix RANN zero-distance bug
2013-09-04 13:44 rsbivand
* R/error.spsarlm.R, man/errorsarlm.Rd: adding SLX as lmSLX
2013-09-04 13:03 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R, man/errorsarlm.Rd:
adding SLX as lmSLX
2013-09-02 08:40 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-09-02 08:39 rsbivand
* R/AAA.R, R/nbcosts.R, R/prunecost.R: block windows mc.cores > 1
(temp fix)
2013-09-02 08:07 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-09-02 08:06 rsbivand
* DESCRIPTION, R/AAA.R, R/nbcosts.R, R/prunecost.R: block windows
mc.cores > 1 (temp fix)
2013-09-01 18:30 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-08-29 13:02 rsbivand
* DESCRIPTION, NAMESPACE, R/autocov.R, R/dnearneigh.R, R/edit.nb.R,
R/impacts.R, R/knearneigh.R, R/nbdists.R, R/poly2nb.R,
R/summary.nb.R, man/edit.nb.Rd, man/poly2nb.Rd, man/trW.Rd,
vignettes/nb.Rnw: remove :::
2013-08-28 13:43 rsbivand
* DESCRIPTION, NAMESPACE, R/aple.mc.R, R/spautolm.R,
man/moran.plot.Rd: tidy
2013-08-28 11:33 rsbivand
* .Rbuildignore, DESCRIPTION, man/getisord.Rd, man/lm.morantest.Rd,
man/moran.mc.Rd: tidy
2013-08-21 10:49 rsbivand
* DESCRIPTION, R/nbcosts.R, R/prunecost.R, data/wheat.txt,
man/wheat.Rd: wheat bug, prunecost/nbcosts
2013-08-07 13:19 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-08-07 13:16 rsbivand
* DESCRIPTION: tidy
2013-07-26 20:34 rsbivand
* DESCRIPTION, NAMESPACE, R/jacobian.R, R/tri2nb.R, man/NY_data.Rd,
man/auckland.Rd, man/columbus.Rd, man/eire.Rd,
man/lm.morantest.exact.Rd, man/lm.morantest.sad.Rd,
man/localmoran.exact.Rd, man/localmoran.sad.Rd, man/mstree.Rd,
man/nb2lines.Rd, man/nc.sids.Rd, man/skater.Rd, man/wheat.Rd,
vignettes/CO69.Rnw: reduce Depends
2013-07-22 07:14 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-07-22 07:13 rsbivand
* DESCRIPTION, R/knearneigh.R, man/knearneigh.Rd: RANN nn -> nn2
2013-07-02 19:04 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-07-02 19:03 rsbivand
* inst/LICENCE, inst/README: tidy
2013-07-02 18:31 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-07-02 18:30 rsbivand
* DESCRIPTION, inst/doc/CO69.Rnw, inst/doc/CO69.pdf,
inst/doc/SpatialFiltering.Rnw, inst/doc/SpatialFiltering.pdf,
inst/doc/nb.Rnw, inst/doc/nb.pdf, inst/doc/sids.Rnw,
inst/doc/sids.pdf, vignettes, vignettes/CO69.Rnw,
vignettes/CO69.pdf, vignettes/SpatialFiltering.Rnw,
vignettes/SpatialFiltering.pdf, vignettes/nb.Rnw,
vignettes/nb.pdf, vignettes/sids.Rnw, vignettes/sids.pdf: move to
vignettes
2013-06-25 17:30 rsbivand
* inst/doc/SpatialFiltering.Rnw, inst/doc/SpatialFiltering.pdf,
inst/doc/nb.Rnw, inst/doc/nb.pdf: adding footnote
2013-06-24 11:57 rsbivand
* DESCRIPTION, R/plot.nb.R, inst/doc/SpatialFiltering.Rnw: plot.nb
2013-06-21 13:44 rsbivand
* DESCRIPTION, inst/doc/SpatialFiltering.Rnw,
inst/doc/backstore/nyME_res.RData: backstoring ME results
2013-06-21 12:08 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-06-21 12:07 rsbivand
* man/impacts.sarlm.Rd, man/lagmess.Rd, man/lm.morantest.exact.Rd,
man/localmoran.exact.Rd, man/spautolm.Rd, man/tolerance.nb.Rd,
man/trW.Rd: changing over-long help page lines
2013-06-20 17:07 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-06-20 17:02 rsbivand
* DESCRIPTION, inst/doc/SpatialFiltering.Rnw,
inst/doc/SpatialFiltering.pdf, inst/doc/nb.Rnw, inst/doc/nb.pdf:
SpatialFiltering vignette
2013-06-20 11:41 rsbivand
* DESCRIPTION, R/mcmcsamp.R, inst/doc/nb.Rnw,
inst/etc/shapes/NY8_utm18.dbf, inst/etc/shapes/NY8_utm18.prj,
inst/etc/shapes/NY8_utm18.shp, inst/etc/shapes/NY8_utm18.shx,
inst/etc/weights/NY_nb.gal, man/MCMCsamp.Rd: nb vignette
beginning
2013-03-30 13:23 rsbivand
* LICENCE, src/dnn.c, src/ml_sse.c, src/polypoly.c, src/skater.c:
remove clang warnings
2013-03-14 16:36 rsbivand
* inst/doc/CO69.Rnw, inst/doc/sids.Rnw: keep.source=FALSE in
vignettes
2013-02-11 07:39 rsbivand
* DESCRIPTION, R/error.spsarlm.R, src/ml_sse.c, src/spdep.h: tidy
2013-01-11 11:13 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2013-01-11 11:11 rsbivand
* DESCRIPTION, R/error.hessian.R, R/error.spsarlm.R, R/impacts.R,
R/lag.hessian.R, R/lag.spsarlm.R, R/moran.exact.R, R/spautolm.R,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/spautolm.Rd: no real and
Hessian variants
2012-12-21 09:25 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2012-12-21 09:24 rsbivand
* R/impacts.R, R/poly2nb.R: clusterExport environment
2012-12-20 12:42 rsbivand
* ChangeLog, inst/ChangeLog: pre_eig documentation
2012-12-20 12:40 rsbivand
* R/sacsarlm.R, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/sacsarlm.Rd, man/spautolm.Rd: pre_eig documentation
2012-12-11 11:46 rsbivand
* DESCRIPTION, NAMESPACE, R/eigenw.R, R/error.spsarlm.R,
R/jacobian.R, R/jacobian_setup.R, R/lag.spsarlm.R, R/sacsarlm.R,
R/spautolm.R, man/do_ldet.Rd, man/eigenw.Rd: adding direct
eigenvalues to fitting functions
2012-12-08 17:53 rsbivand
* man/aple.Rd, man/aple.mc.Rd, man/aple.plot.Rd: changing to
published APLE reference
2012-11-18 19:51 rsbivand
* DESCRIPTION, R/error.hessian.R, R/lag.hessian.R, R/spautolm.R:
Hessian optim > optimHess
2012-11-09 10:12 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2012-11-09 10:11 rsbivand
* DESCRIPTION, NAMESPACE, R/mcmcsamp.R, man/MCMCsamp.Rd,
man/lagsarlm.Rd: replace MCMCpack with LearnBayes
2012-11-08 20:28 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2012-11-08 20:26 rsbivand
* NAMESPACE, R/error.hessian.R, R/error.spsarlm.R, R/lag.hessian.R,
R/lag.spsarlm.R, R/mcmcsamp.R, R/sacsarlm.R, man/MCMCsamp.Rd,
man/errorsarlm.Rd: adding MCMCsamp method for sarlm
2012-11-08 17:16 rsbivand
* R/mcmcsamp.R, R/spautolm.R, man/MCMCsamp.Rd, man/spautolm.Rd:
adding MCMCsamp method for spautolm
2012-11-08 11:05 rsbivand
* man/spautolm.Rd: add fdHess lambda.se to spautolm
2012-11-08 10:49 rsbivand
* R/spautolm.R: add fdHess lambda.se to spautolm
2012-11-07 20:29 rsbivand
* DESCRIPTION, NAMESPACE, R/jacobian_setup.R, R/lag.spsarlm.R,
R/mcmcsamp.R, R/sacsarlm.R, R/spautolm.R, man/GMerrorsar.Rd,
man/sacsarlm.Rd, man/spautolm.Rd: code simplification for
Jacobian
2012-11-07 07:04 rsbivand
* R/error.spsarlm.R, R/jacobian.R, R/jacobian_setup.R,
R/mcmcsamp.R, R/sp.correlogram.R, man/sp.correlogram.Rd: code
simplification for Jacobian
2012-10-18 18:58 rsbivand
* R/jacobian.R: eq7 moments
2012-10-04 03:00 rsbivand
* DESCRIPTION, R/cyclical.R, R/jacobian.R, R/weights-utils.R,
man/do_ldet.Rd: adding cyclical computation
2012-10-03 10:06 rsbivand
* R/weights-utils.R: find cyclical weights
2012-10-03 09:59 rsbivand
* R/weights-utils.R: find cyclical weights
2012-10-03 09:54 rsbivand
* R/weights-utils.R: find cyclical weights
2012-09-25 09:09 rsbivand
* ChangeLog, DESCRIPTION, inst/ChangeLog: tidy
2012-09-23 14:51 rsbivand
* NAMESPACE, R/jacobian.R, man/do_ldet.Rd: add LU pre-permute ldet
2012-09-22 19:12 rsbivand
* R/jacobian.R, man/do_ldet.Rd: add LU pre-permute ldet
2012-09-22 18:51 rsbivand
* DESCRIPTION, NAMESPACE, R/jacobian.R, man/do_ldet.Rd: add LU
pre-permute ldet
2012-09-12 20:21 rsbivand
* DESCRIPTION, R/jacobian.R: m+1 in Rmrho
2012-08-31 12:15 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2012-08-31 12:14 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2012-08-31 12:13 rsbivand
* DESCRIPTION, R/ME.R, man/ME.Rd: remove EISPACK, enforce symmetry
in ME
2012-08-27 19:11 rsbivand
* man/errorsarlm.Rd, man/lagsarlm.Rd: further SE classic additions,
error model
2012-08-27 18:54 rsbivand
* R/error.spsarlm.R: further SE classic additions, error model
2012-08-27 18:52 rsbivand
* R/error.hessian.R, R/error.spsarlm.R, R/lag.hessian.R,
R/lag.spsarlm.R: further SE classic additions, error model
2012-08-27 14:58 rsbivand
* R/jacobian.R, R/lag.spsarlm.R, man/do_ldet.Rd: further SE classic
additions
2012-08-27 07:24 rsbivand
* DESCRIPTION, NAMESPACE, R/jacobian.R, R/lag.spsarlm.R,
man/do_ldet.Rd, man/lagsarlm.Rd: SE_* do_ldet methods to emulate
SE toolbox
2012-08-15 09:00 rsbivand
* R/spautolm.R, R/subset.nb.R: NROW bug in spautolm
2012-07-11 14:58 rsbivand
* DESCRIPTION, R/s2sls.R, R/spautolm.R: correct White HC in stsls
2012-05-23 20:11 rsbivand
* man/impacts.sarlm.Rd: revised impacts help page
2012-05-21 10:46 rsbivand
* R/read.gwt2nb.R: integer in read.dat2listw
2012-05-18 11:59 rsbivand
* DESCRIPTION, R/sacsarlm.R, man/sacsarlm.Rd: limit sacsar fdHess
to nlme
2012-05-17 07:46 rsbivand
* R/skater.R, man/skater.Rd: skater updated
2012-05-11 17:59 rsbivand
* R/summary.spsarlm.R: adding adj.se to summary.sarlm
2012-05-11 17:52 rsbivand
* R/summary.spsarlm.R: adding adj.se to summary.sarlm
2012-05-11 17:40 rsbivand
* DESCRIPTION, R/summary.spsarlm.R, man/summary.sarlm.Rd: adding
adj.se to summary.sarlm
2012-05-06 15:06 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2012-05-06 15:04 rsbivand
* DESCRIPTION, R/aple.mc.R, R/impacts.R, R/poly2nb.R,
man/aple.mc.Rd, man/set.spChkOption.Rd: shift to parallel
2012-05-02 11:23 rsbivand
* man/nb2lines.Rd, man/nb2listw.Rd: minmax in nb2listw help page
2012-04-09 15:13 rsbivand
* R/summary.nb.R: clearer messages in listw summary
2012-04-07 13:20 rsbivand
* R/localmoran.R: add rownames to localmoran
2012-04-05 10:59 rsbivand
* R/moran.R: warnings in moran.test
2012-03-31 08:34 rsbivand
* NAMESPACE, R/lm.LMtests.R, R/sarlm.R, man/lm.LMtests.Rd,
man/predict.sarlm.Rd: summary for LM tests, as.data.frame for
sarlm predictions
2012-03-21 19:23 rsbivand
* DESCRIPTION, R/sarlm.R: added non-W intercept handling to
predict.sarlm
2012-03-17 19:34 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2012-03-17 19:30 rsbivand
* ChangeLog, R/error.spsarlm.R, R/sarlm.R, man/predict.sarlm.Rd:
add emixed to predict
2012-03-16 07:08 rsbivand
* R/impacts.R, R/sarlm.R, man/predict.sarlm.Rd: return samples from
impacts; use samples in predict
2012-03-15 06:55 rsbivand
* DESCRIPTION, R/sarlm.R: alias fix in predict.sarlm
2012-02-24 20:53 rsbivand
* DESCRIPTION, R/bptest.sarlm.R, man/bptest.sarlm.Rd: df bug in
bptest
2011-12-05 12:51 rsbivand
* man/impacts.sarlm.Rd: remove limitation on impacts help page
2011-11-26 11:52 rsbivand
* ChangeLog, inst/ChangeLog: add sd to MC tr
2011-11-26 11:51 rsbivand
* ChangeLog, DESCRIPTION, R/impacts.R, man/do_ldet.Rd, man/trW.Rd:
add sd to MC tr
2011-11-20 17:02 rsbivand
* R/jacobian.R: returning number of corrections used in truncated
moments
2011-11-19 09:51 rsbivand
* DESCRIPTION, R/impacts.R, man/trW.Rd: relax symmetry assertion in
moments tr
2011-11-14 21:15 rsbivand
* DESCRIPTION, R/AAA.R, R/EBI.R, R/ME.R, R/SpatialFiltering.R,
R/aple.mc.R, R/autocov.R, R/diffnb.R, R/eigenw.R,
R/error.spsarlm.R, R/geary.R, R/globalG.R, R/impacts.R, R/jc.R,
R/kpgm_new.R, R/lag.spsarlm.R, R/lm.LMtests.R, R/lm.morantest.R,
R/localG.R, R/localmoran.R, R/localmoran.exact.R, R/mess.R,
R/moran.R, R/moran.exact.R, R/moran.exact.alt.R, R/moran.plot.R,
R/mtlocalmoran.R, R/mtmoran.R, R/nb2listw.R, R/nb2mat.R,
R/poly2nb.R, R/s2sls.R, R/sacsarlm.R, R/sarlm.R,
R/sp.correlogram.R, R/sp.mantel.R, R/spChkOption.R, R/spautolm.R,
R/subset.nb.R, R/summary.nb.R, R/summary.spsarlm.R, R/utils.R,
R/weights-utils.R: complete partial argument matches
2011-11-14 10:32 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2011-11-10 14:45 rsbivand
* R/jacobian.R: MC adjustments
2011-11-10 12:58 rsbivand
* DESCRIPTION, R/jacobian.R: MC adjustments
2011-11-08 09:34 rsbivand
* DESCRIPTION, R/jacobian.R: asy moments
2011-10-07 18:28 rsbivand
* DESCRIPTION, R/read.gwt2nb.R: no-neighbours in nb2INLA
2011-10-06 16:01 rsbivand
* man/do_ldet.Rd: tidy
2011-09-16 08:33 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2011-09-16 08:30 rsbivand
* DESCRIPTION, R/AAA.R, man/LR.sarlm.Rd, man/anova.sarlm.Rd,
man/edit.nb.Rd, man/graphneigh.Rd, man/joincount.multi.Rd,
man/joincount.test.Rd, man/lag.listw.Rd, man/lm.LMtests.Rd,
man/lm.morantest.sad.Rd, man/localmoran.sad.Rd, man/plot.nb.Rd,
man/predict.sarlm.Rd, man/residuals.sarlm.Rd,
man/sp.correlogram.Rd, man/sp.mantel.mc.Rd, man/subset.listw.Rd,
man/subset.nb.Rd, man/summary.nb.Rd, man/trW.Rd: help file S3
cleanup
2011-07-18 19:11 rsbivand
* R/kpgm_new.R: pass zero.policy in GMerrorsar non-legacy branch
2011-07-17 12:18 rsbivand
* DESCRIPTION, R/EBI.R, R/aple.R, R/autocov.R, R/geary.R,
R/globalG.R, R/localG.R, R/localmoran.R, R/moran.plot.R,
R/sp.correlogram.R, R/sp.mantel.R, man/aple.Rd, man/aple.mc.Rd,
man/aple.plot.Rd, man/moran.plot.Rd: enforce vector input for
tests
2011-07-03 18:20 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R, R/lag.spsarlm.R,
R/sarlm.R, man/residuals.sarlm.Rd: first sketch of sarlm vcov
2011-06-29 08:03 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2011-06-29 08:01 rsbivand
* DESCRIPTION: tidy
2011-06-29 07:45 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2011-06-29 07:44 rsbivand
* ChangeLog, R/sarlm.R, inst/ChangeLog: tidy
2011-06-17 12:30 rsbivand
* R/summary.spsarlm.R: adding LM test to SD summary
2011-06-16 10:47 rsbivand
* R/aple.mc.R, R/bptest.sarlm.R, R/error.spsarlm.R,
R/lag.spsarlm.R, R/sacsarlm.R, R/sarlm.R, R/summary.spsarlm.R,
man/bptest.sarlm.Rd, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/localmoran.exact.Rd, man/localmoran.sad.Rd, man/sacsarlm.Rd:
continuing object bloat reduction
2011-06-15 19:54 rsbivand
* DESCRIPTION, R/anova.sarlm.R, R/error.spsarlm.R, R/lag.spsarlm.R,
R/sacsarlm.R, R/sarlm.R, R/spautolm.R, R/summary.spsarlm.R:
incomplete slimming environments
2011-06-12 19:11 rsbivand
* R/aple.R: aple tidy
2011-06-09 15:45 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2011-06-09 15:42 rsbivand
* DESCRIPTION, R/impacts.R, R/kpgm_new.R, R/s2sls.R, man/stsls.Rd:
SEAI modifications
2011-06-01 05:28 rsbivand
* man/rotation.Rd: change rotation example output
2011-06-01 05:14 rsbivand
* R/nbcosts.R, R/prunecost.R, R/skater.R, man/nbcosts.Rd,
man/prunecost.Rd, man/skater.Rd, man/ssw.Rd: update to skater
from Elias T. Krainski
2011-05-30 08:07 rsbivand
* NAMESPACE, R/impacts.R, R/kpgm_new.R, man/gstsls.Rd,
man/impacts.sarlm.Rd: impacts method for gmsar/SARAR
2011-05-28 15:17 rsbivand
* R/kpgm_new.R, man/GMerrorsar.Rd, man/gstsls.Rd: scaleU in
GMerrorsar and gstsls
2011-05-27 21:55 rsbivand
* DESCRIPTION, R/nb2listw.R, man/nb2listw.Rd: examining minmax in
nb2listw
2011-05-19 21:55 rsbivand
* ChangeLog, inst/ChangeLog: integer overflow in poly2nb C code
2011-05-19 21:52 rsbivand
* DESCRIPTION, src/polypoly.c: integer overflow in poly2nb C code
2011-05-05 18:00 rsbivand
* ChangeLog, inst/ChangeLog, inst/doc/CO69.pdf, inst/doc/sids.pdf:
tidy
2011-05-05 16:22 rsbivand
* R/kpgm_new.R, man/GMerrorsar.Rd: GMerrorsar se lambda
2011-05-04 20:06 rsbivand
* R/kpgm_new.R, man/GMerrorsar.Rd: GM lambda standard error
incomplete
2011-05-03 20:39 rsbivand
* DESCRIPTION, NAMESPACE, R/kpgm_new.R, man/GMerrorsar.Rd,
man/gstsls.Rd: GM lambda standard error incomplete
2011-04-16 12:24 rsbivand
* R/kpgm_new.R: tidy
2011-04-16 12:16 rsbivand
* R/kpgm_new.R: tidy
2011-04-16 11:42 rsbivand
* R/kpgm_new.R: Arnold-Wied (2010) moments
2011-04-14 20:16 rsbivand
* DESCRIPTION, R/eigenw.R, R/jacobian.R, R/kpgm_new.R,
man/GMerrorsar.Rd, man/eigenw.Rd, man/gstsls.Rd: complex
eigenvalues
2011-04-13 09:53 rsbivand
* inst/doc/CO69.pdf, inst/doc/sids.pdf, man/eigenw.Rd: complex
eigenvalues
2011-04-12 15:06 rsbivand
* ChangeLog, inst/ChangeLog: fixes for geary.mc and GMerrorsar
2011-04-12 15:05 rsbivand
* DESCRIPTION, R/geary.R, R/kpgm_new.R, man/GMerrorsar.Rd,
man/card.Rd, man/cell2nb.Rd, man/dnearneigh.Rd, man/geary.mc.Rd,
man/graphneigh.Rd, man/knn2nb.Rd, man/nb2INLA.Rd, man/poly2nb.Rd:
fixes for geary.mc and GMerrorsar
2011-03-30 18:51 rsbivand
* DESCRIPTION, NAMESPACE, R/EBI.R, R/read.gwt2nb.R, man/nb2INLA.Rd:
adding INLA nb interface
2011-03-14 09:25 rsbivand
* ChangeLog, inst/ChangeLog: compressing PDFs and data
2011-03-14 09:24 rsbivand
* data/NY_data.rda, data/afcon.rda, data/auckland.rda,
data/baltimore.rda, data/boston.rda, data/columbus.rda,
data/eire.rda, data/elect80.rda, data/getisord.rda,
data/hopkins.rda, data/house.RData, data/huddersfield.rda,
data/nc.sids.rda, data/oldcol.rda, data/used.cars.rda,
inst/doc/CO69.pdf, inst/doc/sids.pdf: compressing PDFs and data
2011-03-14 07:50 rsbivand
* data/00Index: removing data/00Index
2011-03-13 13:23 rsbivand
* ChangeLog, inst/ChangeLog: revise vignettes (thanks to Edzer
Pebesma)
2011-03-13 13:22 rsbivand
* inst/doc/CO69.Rnw, inst/doc/sids.Rnw: revise vignettes (thanks to
Edzer Pebesma)
2011-03-13 12:56 rsbivand
* ChangeLog, inst/ChangeLog: hypot for pythag in C code
2011-03-13 12:54 rsbivand
* DESCRIPTION, src/dnn.c, src/gabriel.c, src/knn.c, src/nbdists.c,
src/polypoly.c, src/relative.c, src/soigraph.c: hypot for pythag
in C code
2011-03-06 18:51 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/jacobian.R, R/lag.spsarlm.R,
man/do_ldet.Rd, man/errorsarlm.Rd, man/lagsarlm.Rd: adding
moments to lag and error
2011-02-24 16:04 rsbivand
* R/EBI.R, R/anova.sarlm.R, R/aple.mc.R, R/diffnb.R, R/droplinks.R,
R/edit.nb.R, R/error.hessian.R, R/error.spsarlm.R, R/geary.R,
R/graph2nb.R, R/impacts.R, R/jacobian.R, R/kpgm_new.R,
R/lag.hessian.R, R/lag.spsarlm.R, R/listw2sn.R, R/lm.LMtests.R,
R/lm.morantest.R, R/localmoran.exact.R, R/moran.R,
R/moran.exact.R, R/moran.exact.alt.R, R/mtlocalmoran.R,
R/mtmoran.R, R/nb2mat.R, R/nblag.R, R/nboperations.R,
R/plot.skater.R, R/poly2nb.R, R/read.gal.R, R/read.gwt2nb.R,
R/s2sls.R, R/sacsarlm.R, R/skater.R, R/sp.mantel.R,
R/spChkOption.R, R/spautolm.R, R/subset.nb.R, R/summary.nb.R,
R/summary.spsarlm.R, R/utils.R, R/weights-utils.R: making length
comparisons literal integers
2011-01-24 08:46 rsbivand
* man/geary.test.Rd: geary.test standard deviate help page
2010-12-21 16:24 rsbivand
* R/sp.correlogram.R: adding Geary C to sp.correlogram
2010-12-21 16:22 rsbivand
* DESCRIPTION, R/nbcosts.R, R/sp.correlogram.R,
man/sp.correlogram.Rd: adding Geary C to sp.correlogram
2010-12-19 19:32 rsbivand
* R/error.spsarlm.R, R/lag.spsarlm.R, R/spautolm.R,
R/summary.spsarlm.R: warnings when rho/lambda at limit
2010-12-14 20:29 rsbivand
* R/s2sls.R: stsls using QR
2010-11-30 22:02 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/impacts.R, R/sacsarlm.R,
R/summary.spsarlm.R, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/sacsarlm.Rd: Elhorst 2010 paper trials
2010-11-25 08:13 rsbivand
* R/lm.morantest.R: as.double N in lm.morantest
2010-11-24 15:14 rsbivand
* R/lm.morantest.R: as.double N in lm.morantest
2010-11-24 14:43 rsbivand
* DESCRIPTION, R/sacsarlm.R, src/dnn.c, src/knn.c, src/nbdists.c:
CheckUserInterrupt in distance C code
2010-11-18 07:52 rsbivand
* .Rbuildignore: add .Rbuildignore
2010-11-17 20:40 rsbivand
* R/impacts.R, man/trW.Rd, src/mom_calc.c: moment calculations
2010-11-17 19:07 rsbivand
* R/impacts.R, R/spChkOption.R, man/trW.Rd, src/mom_calc.c,
src/spdep.h: moment calculations
2010-11-17 13:37 rsbivand
* R/aple.mc.R, R/impacts.R: moment calculations
2010-11-16 21:37 rsbivand
* R/impacts.R, man/trW.Rd: moment calculations
2010-11-16 12:45 rsbivand
* R/impacts.R, src/mom_calc.c: moments calculation
2010-11-15 20:39 rsbivand
* R/impacts.R, src/init.c, src/mom_calc.c, src/spdep.h: moment
calculations
2010-11-11 11:31 rsbivand
* INDEX: tidy
2010-11-10 17:55 rsbivand
* ChangeLog, inst/ChangeLog: impacts summary fix; added
tolerance.nb
2010-11-10 17:54 rsbivand
* R/rotation.R, R/tolerance.nb.R, man/rotation.Rd,
man/tolerance.nb.Rd: impacts summary fix; added tolerance.nb
2010-11-10 17:37 rsbivand
* DESCRIPTION, NAMESPACE, R/impacts.R, man/mat2listw.Rd: impacts
summary fix; added tolerance.nb
2010-11-02 11:20 rsbivand
* R/nb2mat.R: added sparseMatrix to mat2listw
2010-10-31 19:57 rsbivand
* DESCRIPTION, R/nb2mat.R, R/summary.nb.R, man/mat2listw.Rd: added
sparseMatrix to mat2listw
2010-10-30 13:35 rsbivand
* R/nb2mat.R, man/mat2listw.Rd: added style argement to mat2listw
2010-10-08 17:45 rsbivand
* ChangeLog, inst/ChangeLog: sacsarlm optimizers
2010-10-08 12:18 rsbivand
* DESCRIPTION, NAMESPACE, R/kpgm_new.R, man/GMerrorsar.Rd,
man/gstsls.Rd, man/similar.listw.Rd: GM argmin image
2010-10-07 19:55 rsbivand
* man/sacsarlm.Rd: sacsarlm optimizers
2010-10-07 19:01 rsbivand
* R/sacsarlm.R, man/sacsarlm.Rd: sacsarlm optimizers
2010-10-06 18:51 rsbivand
* R/impacts.R, R/sacsarlm.R: sacsarlm optimizers
2010-10-04 19:55 rsbivand
* R/aple.R, R/aple.mc.R, R/apleplot.R, man/aple.Rd, man/aple.mc.Rd,
man/aple.plot.Rd: aple trace option
2010-09-29 08:17 rsbivand
* DESCRIPTION: impacts single x fixes
2010-09-29 08:09 rsbivand
* R/impacts.R: impacts single x fixes
2010-09-29 07:53 rsbivand
* R/impacts.R: impacts single x fixes
2010-09-28 14:22 rsbivand
* DESCRIPTION, R/impacts.R: impacts with one variable
2010-09-13 16:22 rsbivand
* R/s2sls.R: zero.policy in stsls
2010-09-06 07:54 rsbivand
* R/nblag.R: nblag_cumul tidy
2010-09-05 19:13 rsbivand
* DESCRIPTION, R/nblag.R: modified nblag_cumul
2010-09-03 07:07 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2010-09-03 07:04 rsbivand
* DESCRIPTION, R/impacts.R: tidy
2010-09-03 06:47 rsbivand
* R/impacts.R: mom_int export to cl
2010-08-31 07:50 rsbivand
* R/error.spsarlm.R, R/lag.spsarlm.R, R/sacsarlm.R, R/spautolm.R:
tidy
2010-08-28 14:43 rsbivand
* ChangeLog, inst/ChangeLog: as.double to storage.mode
2010-08-28 14:42 rsbivand
* R/dnearneigh.R, R/gabrielneigh.R, R/knearneigh.R, R/relneigh.R,
R/soi.R, R/utils.R: as.double to storage.mode
2010-08-27 19:24 rsbivand
* ChangeLog, inst/ChangeLog: adding moments trace
2010-08-27 19:23 rsbivand
* DESCRIPTION, NAMESPACE, R/edit.nb.R, R/impacts.R, R/jacobian.R,
data/elect80.rda, man/do_ldet.Rd, man/edit.nb.Rd, man/elect80.Rd,
man/trW.Rd: adding moments trace
2010-08-17 14:05 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/jacobian.R, R/lag.spsarlm.R,
R/spautolm.R, man/do_ldet.Rd, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/spautolm.Rd: folding spam_update and Matrix_J into fit
functions
2010-08-16 16:29 rsbivand
* ChangeLog, inst/ChangeLog: adding spam_update method
2010-08-16 16:27 rsbivand
* DESCRIPTION, NAMESPACE, R/jacobian.R, man/do_ldet.Rd: adding
spam_update method
2010-08-13 11:34 rsbivand
* R/jacobian.R, R/nb2listw.R: spam similarity safemode relaxation
2010-08-13 00:38 rsbivand
* R/jacobian.R: spam similarity safemode relaxation
2010-08-13 00:37 rsbivand
* R/jacobian.R: adding Matrix_J without updating
2010-08-12 21:31 rsbivand
* DESCRIPTION, NAMESPACE, R/jacobian.R, man/do_ldet.Rd: adding
Matrix_J without updating
2010-07-31 14:08 rsbivand
* ChangeLog, inst/ChangeLog: retrofit polylist in edit.nb()
2010-07-31 14:08 rsbivand
* DESCRIPTION, R/edit.nb.R, man/edit.nb.Rd: retrofit polylist in
edit.nb()
2010-07-07 21:06 rsbivand
* ChangeLog, inst/ChangeLog: adding gstsls
2010-07-07 21:02 rsbivand
* man/gstsls.Rd: adding gstsls
2010-07-07 14:22 rsbivand
* ChangeLog, inst/ChangeLog: spautolm Nagelkerke fix
2010-07-07 14:21 rsbivand
* ChangeLog, inst/ChangeLog: spautolm Nagelkerke fix
2010-07-07 14:20 rsbivand
* R/summary.spsarlm.R: spautolm Nagelkerke fix
2010-07-03 20:54 rsbivand
* ChangeLog, inst/ChangeLog: adding gstsls
2010-07-03 20:50 rsbivand
* INDEX: adding gstsls
2010-07-03 20:49 rsbivand
* DESCRIPTION, NAMESPACE, R/kpgm_new.R, man/GMerrorsar.Rd: adding
gstsls
2010-06-25 11:29 rsbivand
* ChangeLog, inst/ChangeLog: mention large n in ML docs
2010-06-25 11:28 rsbivand
* man/errorsarlm.Rd, man/lagsarlm.Rd, man/spautolm.Rd: mention
large n in ML docs
2010-06-24 16:44 rsbivand
* R/plot.nb.R, R/tri2nb.R, man/tri2nb.Rd: duplicate coords
protection in tri2nb().
2010-06-24 12:57 rsbivand
* DESCRIPTION, R/autocov.R, R/dnearneigh.R, R/knearneigh.R,
R/nbdists.R, R/summary.nb.R: longlat protection in dnearneigh()
etc.
2010-06-23 08:54 rsbivand
* ChangeLog, inst/ChangeLog: probmap/choynowski clarification
2010-06-23 08:54 rsbivand
* DESCRIPTION, R/EBI.R, R/choynowski.R, man/choynowski.Rd:
probmap/choynowski clarification
2010-06-22 08:41 rsbivand
* ChangeLog, inst/ChangeLog: probmap and choynowski clarification,
thanks to Michael Hoehle
2010-06-22 08:40 rsbivand
* DESCRIPTION, R/EBI.R, R/choynowski.R, man/choynowski.Rd,
man/probmap.Rd: probmap and choynowski clarification, thanks to
Michael Hoehle
2010-06-17 12:07 rsbivand
* ChangeLog, inst/ChangeLog: trap 2-column sparse neighbour file
2010-06-17 12:07 rsbivand
* ChangeLog, inst/ChangeLog: trap 2-column sparse neighbour file
2010-06-17 12:06 rsbivand
* DESCRIPTION, R/read.gwt2nb.R, man/read.gwt2nb.Rd: trap 2-column
sparse neighbour file
2010-06-04 19:15 rsbivand
* ChangeLog, inst/ChangeLog: sphet hooks
2010-06-04 19:14 rsbivand
* R/impacts.R: sphet hooks
2010-06-04 16:16 rsbivand
* ChangeLog, inst/ChangeLog: sphet hooks
2010-06-04 16:16 rsbivand
* DESCRIPTION, R/impacts.R: sphet hooks
2010-06-01 09:29 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2010-06-01 09:27 rsbivand
* R/kpgm_new.R: tidy
2010-05-30 10:06 rsbivand
* ChangeLog, inst/ChangeLog: correct errorsarlm analytical SE
2010-05-30 10:06 rsbivand
* DESCRIPTION, R/error.hessian.R, R/error.spsarlm.R,
R/lag.spsarlm.R: correct errorsarlm analytical SE
2010-05-29 13:52 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2010-05-29 13:52 rsbivand
* DESCRIPTION: tidy
2010-05-22 08:47 rsbivand
* R/sacsarlm.R: llprof
2010-05-21 16:54 rsbivand
* DESCRIPTION, R/sacsarlm.R, man/sacsarlm.Rd: sacsar ll profile
2010-05-19 09:59 rsbivand
* INDEX: adding SAC/SARAR ML model
2010-05-19 09:47 rsbivand
* ChangeLog, inst/ChangeLog: adding SAC/SARAR ML model
2010-05-19 09:46 rsbivand
* DESCRIPTION, NAMESPACE, R/impacts.R, R/jacobian.R, R/sacsarlm.R,
R/sarlm.R, R/summary.spsarlm.R, man/do_ldet.Rd,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/sacsarlm.Rd, src/lagw.c:
adding SAC/SARAR ML model
2010-05-11 17:51 rsbivand
* ChangeLog, inst/ChangeLog: Nagelkerke in spautolm summary
2010-05-11 17:50 rsbivand
* man/spautolm.Rd: Nagelkerke in spautolm summary
2010-05-11 17:32 rsbivand
* R/spautolm.R, man/spautolm.Rd: Nagelkerke in spautolm summary
2010-05-06 10:34 rsbivand
* ChangeLog, inst/ChangeLog: poly2nb: use SpatialPolygons instead
of polylist by default
2010-05-06 10:32 rsbivand
* DESCRIPTION: poly2nb: use SpatialPolygons instead of polylist by
default
2010-05-06 10:22 rsbivand
* R/poly2nb.R, man/poly2nb.Rd: poly2nb: use SpatialPolygons instead
of polylist by default
2010-05-05 08:44 rsbivand
* ChangeLog, inst/ChangeLog: pass foundInBox to poly2nb
2010-05-05 08:43 rsbivand
* R/poly2nb.R, man/poly2nb.Rd: pass foundInBox to poly2nb
2010-05-03 11:27 rsbivand
* R/poly2nb.R, man/poly2nb.Rd, src/init.c, src/polypoly.c,
src/spdep.h: more poly2nb speedups
2010-04-30 07:06 rsbivand
* man/do_ldet.Rd: examples for do_ldet
2010-04-29 18:54 rsbivand
* ChangeLog, inst/ChangeLog: documenting do_ldet
2010-04-29 18:52 rsbivand
* man/do_ldet.Rd: documenting do_ldet
2010-04-29 18:52 rsbivand
* NAMESPACE: documenting do_ldet
2010-04-29 14:34 rsbivand
* R/poly2nb.R, man/poly2nb.Rd, src/polypoly.c: back out of knn for
poly2nb
2010-04-28 08:45 rsbivand
* R/listw2sn.R: tidy
2010-04-28 08:34 rsbivand
* DESCRIPTION, INDEX, R/knearneigh.R, R/poly2nb.R,
man/knearneigh.Rd, man/poly2nb.Rd: tidy
2010-04-26 08:34 rsbivand
* ChangeLog, R/lag.spsarlm.R, R/poly2nb.R, man/poly2nb.Rd: more
poly2nb changes
2010-04-22 02:50 rsbivand
* DESCRIPTION, R/poly2nb.R, src/init.c, src/polypoly.c,
src/spdep.h: poly2nb speedup
2010-04-21 02:49 rsbivand
* DESCRIPTION, NAMESPACE, R/AAA.R, R/aple.mc.R, R/spChkOption.R,
man/set.spChkOption.Rd: zeroPolicy problem
2010-04-17 22:18 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R, R/jacobian.R,
R/kpgm_new.R, R/lag.spsarlm.R, R/listw2sn.R, R/nb2listw.R,
R/spautolm.R, man/impacts.sarlm.Rd, man/lagsarlm.Rd,
man/listw2sn.Rd: spam as suggested
2010-04-02 10:20 rsbivand
* ChangeLog, inst/ChangeLog: control list documentation
2010-04-02 10:19 rsbivand
* DESCRIPTION, man/errorsarlm.Rd, man/lagsarlm.Rd, man/spautolm.Rd:
control list documentation
2010-04-01 14:50 rsbivand
* R/impacts.R: impacts conflict
2010-04-01 14:05 rsbivand
* R/moran.plot.R: moran.plot zero.policy issue
2010-03-24 13:40 rsbivand
* R/impacts.R: fix cluster bloat
2010-03-24 11:58 rsbivand
* DESCRIPTION, R/impacts.R, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/spautolm.Rd: avoiding cluster bloat
2010-03-22 12:08 rsbivand
* INDEX: tidy
2010-03-22 11:10 rsbivand
* ChangeLog, inst/ChangeLog: spautolm rewritten to use shared code
2010-03-22 11:09 rsbivand
* R/spautolm.R, inst/doc/sids.Rnw, man/spautolm.Rd: spautolm
rewritten to use shared code
2010-03-22 10:32 rsbivand
* ChangeLog, inst/ChangeLog: spautolm rewritten to use shared code
2010-03-22 10:31 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/jacobian.R, R/lag.spsarlm.R,
R/spautolm.R, inst/doc/sids.Rnw, man/errorsarlm.Rd,
man/lagsarlm.Rd, man/spautolm.Rd: spautolm rewritten to use
shared code
2010-03-19 20:58 rsbivand
* ChangeLog, inst/ChangeLog: adding some cluster awareness
2010-03-19 20:57 rsbivand
* R/impacts.R: adding some cluster awareness
2010-03-19 20:13 rsbivand
* ChangeLog, inst/ChangeLog: adding some cluster awareness
2010-03-19 20:12 rsbivand
* DESCRIPTION, NAMESPACE, R/EBI.R, R/aple.mc.R, R/geary.R,
R/impacts.R, R/moran.R, R/sp.mantel.R, R/spChkOption.R,
man/EBImoran.mc.Rd, man/aple.mc.Rd, man/geary.mc.Rd,
man/localmoran.exact.Rd, man/moran.mc.Rd, man/set.spChkOption.Rd,
man/sp.mantel.mc.Rd: adding some cluster awareness
2010-03-18 19:21 rsbivand
* ChangeLog, inst/ChangeLog: modularising ML code, adding Jacobian
methods
2010-03-18 19:20 rsbivand
* DESCRIPTION, R/error.hessian.R, R/error.spsarlm.R, R/jacobian.R,
R/lag.hessian.R, R/lag.spsarlm.R, man/boston.Rd,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/used.cars.Rd, src/init.c:
modularising ML code, adding Jacobian methods
2010-03-17 21:00 rsbivand
* DESCRIPTION, R/error.hessian.R, R/error.spsarlm.R, R/impacts.R,
R/lag.hessian.R, R/lag.spsarlm.R, man/lagsarlm.Rd, src/card.c,
src/dfs_ncomp.c, src/dnn.c, src/gabriel.c, src/gearyw.c,
src/gsymtest.c, src/init.c, src/insiders.c, src/jc.c, src/knn.c,
src/lagw.c, src/listw2Matrix.c, src/listw2sn.c, src/ml_sse.c,
src/nbdists.c, src/polypoly.c, src/relative.c, src/skater.c,
src/soigraph.c, src/spdep.h, src/symtest.c: sse C code; impacts
cluster
2010-03-16 13:46 rsbivand
* ChangeLog, inst/ChangeLog: timing and other changes to lag, error
and impact calculations
2010-03-16 13:46 rsbivand
* ChangeLog, inst/ChangeLog: timing and other changes to lag, error
and impact calculations
2010-03-16 13:36 rsbivand
* R/AAA.R, R/error.hessian.R, R/error.spsarlm.R, R/impacts.R,
R/lag.hessian.R, R/lag.spsarlm.R, R/nb2mat.R,
R/summary.spsarlm.R, data/elect80.rda, man/elect80.Rd,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/stsls.Rd, src/Makevars,
src/ml_sse.c: timing and other changes to lag, error and impact
calculations
2010-03-13 11:16 rsbivand
* ChangeLog, inst/ChangeLog: tidy stsls
2010-03-13 11:15 rsbivand
* R/s2sls., R/s2sls.R, man/stsls.Rd: tidy stsls
2010-03-12 22:12 gpiras
* man/stsls.Rd: add stsls help including the new argument W2X
2010-03-12 22:11 gpiras
* man/stsls.Rd: remove stsls help
2010-03-12 22:07 gpiras
* R/s2sls.: Add the argument W2X to stsls
2010-03-12 22:05 gpiras
* R/s2sls.R: remove stsls
2010-03-12 15:31 rsbivand
* DESCRIPTION, R/AAA.R, R/EBI.R, R/ME.R, R/SpatialFiltering.R,
R/autocov.R, R/diffnb.R, R/eigenw.R, R/error.spsarlm.R,
R/geary.R, R/globalG.R, R/impacts.R, R/jc.R, R/kpgm_new.R,
R/lag.spsarlm.R, R/lm.LMtests.R, R/lm.morantest.R, R/localG.R,
R/localmoran.R, R/localmoran.exact.R, R/mess.R, R/moran.R,
R/moran.exact.R, R/moran.exact.alt.R, R/moran.plot.R,
R/mtlocalmoran.R, R/mtmoran.R, R/nb2listw.R, R/nb2mat.R,
R/s2sls.R, R/sarlm.R, R/sp.correlogram.R, R/sp.mantel.R,
R/spChkOption.R, R/spautolm.R, R/subset.nb.R, R/summary.nb.R,
R/utils.R, R/weights-utils.R, man/EBImoran.mc.Rd, man/EBlocal.Rd,
man/GMerrorsar.Rd, man/ME.Rd, man/SpatialFiltering.Rd,
man/autocov_dist.Rd, man/diffnb.Rd, man/eigenw.Rd,
man/errorsarlm.Rd, man/geary.Rd, man/geary.mc.Rd,
man/geary.test.Rd, man/globalG.test.Rd, man/joincount.test.Rd,
man/lag.listw.Rd, man/lagmess.Rd, man/lagsarlm.Rd,
man/lm.LMtests.Rd, man/lm.morantest.Rd,
man/lm.morantest.exact.Rd, man/lm.morantest.sad.Rd,
man/localG.Rd, man/localmoran.Rd, man/localmoran.exact.Rd,
man/localmoran.sad.Rd, man/moran.Rd, man/moran.mc.Rd,
man/moran.plot.Rd, man/moran.test.Rd, man/nb2listw.Rd,
man/nb2mat.Rd, man/predict.sarlm.Rd, man/set.spChkOption.Rd,
man/sp.correlogram.Rd, man/sp.mantel.mc.Rd, man/spautolm.Rd,
man/spweights.constants.Rd, man/stsls.Rd, man/subset.listw.Rd,
man/summary.nb.Rd, man/testnb.Rd: moving verbose/quiet and
zero.policy to global options
2010-02-24 18:29 rsbivand
* ChangeLog, inst/ChangeLog: errorsarlm resvar bugfix
2010-02-24 18:29 rsbivand
* DESCRIPTION, R/error.spsarlm.R: errorsarlm resvar bugfix
2010-02-03 13:49 rsbivand
* ChangeLog, inst/ChangeLog: adding MESS function
2010-02-03 13:47 rsbivand
* DESCRIPTION, INDEX, NAMESPACE, R/mess.R, R/summary.spsarlm.R,
man/lagmess.Rd: adding MESS function
2010-01-28 12:24 rsbivand
* DESCRIPTION, R/globalG.R, man/globalG.test.Rd, man/skater.Rd,
man/ssw.Rd: global G warning not error for non-binary weights
2009-12-15 17:16 rsbivand
* ChangeLog, inst/ChangeLog: convert impacts to method, provide
sarlm and stsls methods
2009-12-15 17:16 rsbivand
* R/impacts.R: convert impacts to method, provide sarlm and stsls
methods
2009-12-15 08:40 rsbivand
* ChangeLog, inst/ChangeLog: adding Hausman test for GMerrorsar
2009-12-15 08:39 rsbivand
* NAMESPACE, R/kpgm_new.R, R/summary.spsarlm.R, man/GMerrorsar.Rd,
man/LR.sarlm.Rd, man/errorsarlm.Rd, man/summary.sarlm.Rd: adding
Hausman test for GMerrorsar
2009-12-14 20:01 rsbivand
* ChangeLog, inst/ChangeLog: convert impacts to method, provide
sarlm and stsls methods
2009-12-14 19:59 rsbivand
* DESCRIPTION, NAMESPACE, R/impacts.R, R/s2sls.R,
man/impacts.sarlm.Rd, man/lagsarlm.Rd: convert impacts to method,
provide sarlm and stsls methods
2009-12-12 09:51 rsbivand
* ChangeLog, inst/ChangeLog: updating stsls
2009-12-12 09:50 rsbivand
* DESCRIPTION, NAMESPACE, R/s2sls.R, man/stsls.Rd: updating stsls
2009-11-26 14:32 rsbivand
* ChangeLog, inst/ChangeLog: NAMESPACE cleaning
2009-11-26 14:31 rsbivand
* ChangeLog, DESCRIPTION, NAMESPACE, inst/ChangeLog: NAMESPACE
cleaning
2009-11-26 08:07 rsbivand
* ChangeLog, inst/ChangeLog: nb2WB no neighbours fix
2009-11-26 08:07 rsbivand
* man/nb2lines.Rd: nb2WB no neighbours fix
2009-11-26 07:43 rsbivand
* ChangeLog, inst/ChangeLog: nb2WB no neighbours fix
2009-11-26 07:42 rsbivand
* DESCRIPTION, R/nb2listw.R: nb2WB no neighbours fix
2009-11-03 22:35 rsbivand
* ChangeLog, inst/ChangeLog: replacing tripack with deldir
2009-11-03 22:35 rsbivand
* DESCRIPTION, R/nblag.R, R/tri2nb.R, man/tri2nb.Rd: replacing
tripack with deldir
2009-11-03 21:18 rsbivand
* ChangeLog, inst/ChangeLog: errorsarlm no-intercept problem
2009-11-03 21:17 rsbivand
* DESCRIPTION, R/error.spsarlm.R: errorsarlm no-intercept problem
2009-11-01 10:05 rsbivand
* inst/ChangeLog: fix for writing GWT; impact Q components
2009-11-01 10:04 rsbivand
* ChangeLog: fix for writing GWT; impact Q components
2009-11-01 10:01 rsbivand
* DESCRIPTION, R/impacts.R, R/read.gwt2nb.R, man/impacts.sarlm.Rd,
man/invIrM.Rd, man/joincount.multi.Rd, man/nb2blocknb.Rd,
man/read.gwt2nb.Rd: fix for writing GWT; impact Q components
2009-10-19 17:22 rsbivand
* ChangeLog, inst/ChangeLog: tidy
2009-10-19 17:21 rsbivand
* R/error.hessian.R, R/summary.spsarlm.R: tidy
2009-10-17 19:38 rsbivand
* ChangeLog, inst/ChangeLog: move errorsarlm/Matrix to Cholesky
2009-10-17 19:37 rsbivand
* R/error.hessian.R, R/error.spsarlm.R: move errorsarlm/Matrix to
Cholesky
2009-10-16 15:42 rsbivand
* ChangeLog, inst/ChangeLog: make Hausman test optional in
summary.sarlm
2009-10-16 15:40 rsbivand
* DESCRIPTION, R/nb2mat.R, R/summary.spsarlm.R,
man/summary.sarlm.Rd: make Hausman test optional in summary.sarlm
2009-10-12 19:22 rsbivand
* ChangeLog, inst/ChangeLog: reduce check time use by thinning
examples
2009-10-12 19:21 rsbivand
* DESCRIPTION, inst/doc/CO69.Rnw,
inst/doc/backstore/boot_res.RData: reduce check time use by
thinning examples
2009-10-12 18:57 rsbivand
* ChangeLog, inst/ChangeLog: reduce check time use by thinning
examples
2009-10-12 18:55 rsbivand
* DESCRIPTION, inst/doc/CO69.Rnw, inst/doc/backstore,
inst/doc/backstore/boot_res.RData, man/ME.Rd, man/aple.mc.Rd,
man/aple.plot.Rd, man/impacts.sarlm.Rd, man/joincount.multi.Rd,
man/spautolm.Rd: reduce check time use by thinning examples
2009-10-12 11:08 rsbivand
* ChangeLog, inst/ChangeLog: bug fix in trW for MC method
2009-10-12 11:02 rsbivand
* DESCRIPTION, R/impacts.R, man/trW.Rd: bug fix in trW for MC
method
2009-10-06 19:19 rsbivand
* INDEX, man/GMerrorsar.Rd: tidy
2009-09-25 12:55 rsbivand
* ChangeLog, inst/ChangeLog: lambda standard error for large data
sets
2009-09-25 12:55 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/lag.spsarlm.R,
man/errorsarlm.Rd, man/lagsarlm.Rd: lambda standard error for
large data sets
2009-09-25 12:43 rsbivand
* ChangeLog, inst/ChangeLog: lambda standard error for large data
sets
2009-09-25 12:42 rsbivand
* ChangeLog, inst/ChangeLog: lambda standard error for large data
sets
2009-09-25 12:42 rsbivand
* R/error.hessian.R: lambda standard error for large data sets
2009-09-24 19:21 rsbivand
* ChangeLog, inst/ChangeLog: lambda standard error for large data
sets
2009-09-24 19:20 rsbivand
* man/impacts.sarlm.Rd: lambda standard error for large data sets
2009-09-24 19:09 rsbivand
* ChangeLog, inst/ChangeLog: lambda standard error for large data
sets
2009-09-24 19:04 rsbivand
* R/error.spsarlm.R, R/lag.spsarlm.R, R/spautolm.R,
R/summary.spsarlm.R, man/errorsarlm.Rd, man/lagsarlm.Rd: lambda
standard error for large data sets
2009-09-24 14:54 rsbivand
* DESCRIPTION, R/error.spsarlm.R, man/errorsarlm.Rd, man/invIrM.Rd:
lambda standard error for large data sets
2009-09-24 08:46 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R, R/nb2mat.R,
R/summary.spsarlm.R, man/LR.sarlm.Rd, man/errorsarlm.Rd,
man/invIrM.Rd: spatial Hausman for large data sets
2009-09-23 07:32 rsbivand
* ChangeLog, inst/ChangeLog: added spatial Hausman test for error
model
2009-09-23 07:31 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R, R/summary.spsarlm.R,
man/LR.sarlm.Rd, man/summary.sarlm.Rd: added spatial Hausman test
for error model
2009-09-22 16:56 rsbivand
* ChangeLog, inst/ChangeLog: fix no intercept bug
2009-09-22 16:55 rsbivand
* R/impacts.R: fix no intercept bug
2009-09-22 09:18 rsbivand
* man/lagsarlm.Rd: mixed approximate/asymptotic Hessian
2009-09-22 08:38 rsbivand
* DESCRIPTION, R/impacts.R, R/lag.hessian.R, R/lag.spsarlm.R,
man/impacts.sarlm.Rd, man/lagsarlm.Rd: mixed
approximate/asymptotic Hessian
2009-09-20 18:35 rsbivand
* ChangeLog, inst/ChangeLog: mixed approximate/asymptotic Hessian
2009-09-20 18:34 rsbivand
* DESCRIPTION, R/lag.spsarlm.R, R/summary.spsarlm.R,
man/summary.sarlm.Rd: mixed approximate/asymptotic Hessian
2009-09-19 19:49 rsbivand
* ChangeLog, inst/ChangeLog: add house data set
2009-09-19 19:48 rsbivand
* man/impacts.sarlm.Rd, man/lagsarlm.Rd: add house data set
2009-09-19 19:18 rsbivand
* ChangeLog, inst/ChangeLog: add house data set
2009-09-19 19:16 rsbivand
* data/house.RData, man/house.Rd: add house data set
2009-09-19 18:45 rsbivand
* ChangeLog, inst/ChangeLog: mixed approximate/asymptotic Hessian
2009-09-19 18:44 rsbivand
* man/lagsarlm.Rd: mixed approximate/asymptotic Hessian
2009-09-19 16:17 rsbivand
* ChangeLog, inst/ChangeLog: mixed approximate/asymptotic Hessian
2009-09-19 16:15 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/lag.hessian.R, R/lag.spsarlm.R,
R/summary.spsarlm.R, man/as_dgRMatrix_listw.Rd,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/summary.sarlm.Rd: mixed
approximate/asymptotic Hessian
2009-09-14 14:06 rsbivand
* R/summary.spsarlm.R: impacts for lag and mixed spatial
regressions
2009-09-14 13:31 rsbivand
* R/summary.spsarlm.R: impacts for lag and mixed spatial
regressions
2009-09-14 13:10 rsbivand
* R/summary.spsarlm.R: impacts for lag and mixed spatial
regressions
2009-09-14 12:32 rsbivand
* R/lag.spsarlm.R, R/summary.spsarlm.R, man/lagsarlm.Rd: impacts
for lag and mixed spatial regressions
2009-09-14 08:26 rsbivand
* ChangeLog, inst/ChangeLog: impacts for lag and mixed spatial
regressions
2009-09-14 08:24 rsbivand
* DESCRIPTION, R/lag.spsarlm.R, R/summary.spsarlm.R,
man/impacts.sarlm.Rd, man/lagsarlm.Rd: impacts for lag and mixed
spatial regressions
2009-09-13 19:42 rsbivand
* R/error.spsarlm.R, R/kpgm_new.R, R/lag.hessian.R,
R/lag.spsarlm.R, R/spautolm.R, man/as_dgRMatrix_listw.Rd,
man/impacts.sarlm.Rd: impacts for lag and mixed spatial
regressions
2009-09-13 17:42 rsbivand
* R/impacts.R, R/lag.hessian.R, R/lag.spsarlm.R,
man/impacts.sarlm.Rd, man/lagsarlm.Rd: impacts for lag and mixed
spatial regressions
2009-09-12 21:15 rsbivand
* DESCRIPTION, R/impacts.R, R/lag.hessian.R, R/lag.spsarlm.R,
man/impacts.sarlm.Rd, man/lagsarlm.Rd: impacts for lag and mixed
spatial regressions
2009-09-12 11:54 rsbivand
* ChangeLog, inst/ChangeLog: impacts for lag and mixed spatial
regressions
2009-09-12 11:52 rsbivand
* NAMESPACE, R/impacts.R, R/lag.spsarlm.R, man/impacts.sarlm.Rd,
man/trW.Rd: impacts for lag and mixed spatial regressions
2009-09-11 19:45 rsbivand
* DESCRIPTION, NAMESPACE, R/impacts.R, R/lag.spsarlm.R: impacts for
lag and mixed spatial regressions
2009-09-06 10:04 rsbivand
* ChangeLog, inst/ChangeLog: fix bugs in residuals.spautolm for
non-NULL na.act
2009-09-06 10:02 rsbivand
* ChangeLog, R/error.spsarlm.R, R/lag.spsarlm.R, R/spautolm.R,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/spautolm.Rd: fix bugs in
residuals.spautolm for non-NULL na.act
2009-08-17 13:26 rsbivand
* DESCRIPTION, inst/doc/00Index.dcf, inst/doc/CO69.Rnw,
inst/doc/sids.Rnw, inst/etc/misc/geary_eire.txt,
inst/etc/misc/raw_grass_borders.RData,
inst/etc/misc/unstand_sn.txt, man/lm.morantest.sad.Rd,
man/localmoran.sad.Rd: adding Cliff & Ord 1969 vignette
2009-08-09 17:47 rsbivand
* inst/ChangeLog: speedup for make.sym.nb when all observations
have neighbours
2009-08-09 17:47 rsbivand
* ChangeLog: speedup for make.sym.nb when all observations have
neighbours
2009-08-09 14:39 rsbivand
* DESCRIPTION, NAMESPACE, R/weights-utils.R, man/testnb.Rd: speedup
for make.sym.nb when all observations have neighbours
2009-06-29 12:32 rsbivand
* ChangeLog, inst/ChangeLog: aple similarity check override
2009-06-29 12:30 rsbivand
* ChangeLog, R/aple.R: aple similarity check override
2009-06-29 12:26 rsbivand
* R/aple.R, R/aple.mc.R, R/apleplot.R, man/aple.Rd, man/aple.mc.Rd,
man/aple.plot.Rd, man/moran.test.Rd: Geary reversal
2009-06-09 16:36 rsbivand
* R/geary.R: Geary's C standard deviate
2009-06-09 16:26 rsbivand
* R/geary.R, man/geary.test.Rd: Geary's C standard deviate
2009-06-09 14:41 rsbivand
* DESCRIPTION, R/geary.R, man/geary.test.Rd: Geary's C standard
deviate
2009-04-27 19:28 rsbivand
* R/sarlm.R: predict sarlm details
2009-02-27 12:10 rsbivand
* R/moran.exact.R, R/mtmoran.R: first zero eiegenvalue in
lm.morantest.*
2009-01-21 12:24 rsbivand
* ChangeLog, inst/ChangeLog: gabriel/relative memory overruns; new
parser help file changes
2009-01-21 10:31 rsbivand
* ChangeLog, DESCRIPTION, R/gabrielneigh.R, R/relneigh.R,
inst/ChangeLog, man/GMerrorsar.Rd, man/bhicv.Rd, man/eigenw.Rd,
man/errorsarlm.Rd, man/graphneigh.Rd, man/lagsarlm.Rd,
man/listw2sn.Rd, man/lm.LMtests.Rd, man/nblag.Rd,
man/spautolm.Rd, src/gabriel.c, src/relative.c: gabriel/relative
memory overruns; new parser help file changes
2009-01-02 19:08 rsbivand
* ChangeLog, R/utils.R, man/lag.listw.Rd, src/lagw.c: fix NAs in
lag.listw
2008-11-25 20:29 rsbivand
* DESCRIPTION, R/localmoran.exact.R, R/moran.exact.R,
man/lm.morantest.exact.Rd, man/localmoran.exact.Rd: substitute
Normal for exact for out of domain II
2008-11-23 02:02 rsbivand
* DESCRIPTION, R/moran.exact.R, R/spautolm.R, R/weights-utils.R:
SMA revisions
2008-11-19 22:54 rsbivand
* DESCRIPTION, R/kpgm_new.R, man/GMerrorsar.Rd: GM revisions
2008-11-10 20:02 rsbivand
* R/prunecost.R: fix drop bug in ssw
2008-11-10 18:21 rsbivand
* DESCRIPTION: fix drop bug in ssw
2008-11-10 18:18 rsbivand
* R/prunecost.R: fix drop bug in ssw
2008-10-25 15:34 rsbivand
* ChangeLog, inst/ChangeLog: changelog
2008-10-24 11:16 rsbivand
* DESCRIPTION, NAMESPACE, R/apleplot.R, man/aple.plot.Rd: local
aple
2008-10-12 14:13 rsbivand
* ChangeLog, inst/ChangeLog: changelog
2008-10-12 14:12 rsbivand
* ChangeLog, DESCRIPTION, INDEX, NAMESPACE, R/apleplot.R,
inst/ChangeLog, man/aple.Rd, man/aple.plot.Rd: adding aple
2008-10-11 12:19 rsbivand
* R/aple.R, R/aple.mc.R, data/wheat.txt, inst/etc/shapes/wheat.dbf,
inst/etc/shapes/wheat.shp, inst/etc/shapes/wheat.shx,
man/aple.Rd, man/aple.mc.Rd, man/wheat.Rd: adding aple
2008-10-11 12:17 rsbivand
* ChangeLog, DESCRIPTION, INDEX, NAMESPACE, inst/ChangeLog: adding
aple
2008-10-03 06:20 rsbivand
* man/aggregate.nb.Rd: aggregate.nb, edit.nb
2008-10-02 21:17 rsbivand
* ChangeLog, inst/ChangeLog: merging SKATER regionalisation
functions
2008-10-02 21:16 rsbivand
* ChangeLog, inst/ChangeLog: merging SKATER regionalisation
functions
2008-10-02 21:14 rsbivand
* R/mstree.R, R/nbcosts.R, R/plot.mst.R, R/plot.skater.R,
R/prunecost.R, R/prunemst.R, R/skater.R,
inst/etc/shapes/bhicv.dbf, inst/etc/shapes/bhicv.shp,
inst/etc/shapes/bhicv.shx, man/bhicv.Rd, man/mstree.Rd,
man/nbcosts.Rd, man/plot.mst.Rd, man/plot.skater.Rd,
man/prunecost.Rd, man/prunemst.Rd, man/skater.Rd, man/ssw.Rd,
src/skater.c: merging SKATER regionalisation functions
2008-10-02 21:09 rsbivand
* ChangeLog, DESCRIPTION, NAMESPACE, R/edit.nb.R, R/plot.nb.R,
R/weights-utils.R, inst/ChangeLog, man/plot.nb.Rd: aggregate.nb,
edit.nb
2008-09-18 12:21 rsbivand
* DESCRIPTION, inst/doc/sids.Rnw: vignette
2008-09-18 07:18 rsbivand
* DESCRIPTION, R/nb2mat.R, inst/doc/sids.Rnw: vignette (FIXME),
double mat2listw
2008-08-14 12:55 rsbivand
* inst/doc/sids.Rnw, man/spautolm.Rd: mdata in spautolm help file
2008-06-27 09:56 rsbivand
* ChangeLog, inst/ChangeLog: truncation point in exact Moran
2008-06-27 09:40 rsbivand
* DESCRIPTION, R/localmoran.exact.R, R/moran.exact.R,
R/moran.exact.alt.R, man/lm.morantest.exact.Rd,
man/localmoran.exact.Rd: truncation point in exact Moran
2008-06-19 04:08 rsbivand
* man/SpatialFiltering.Rd: link
2008-06-03 13:56 rsbivand
* DESCRIPTION, R/EBI.R, R/droplinks.R, R/edit.nb.R,
R/localmoran.exact.R, R/moran.exact.alt.R, R/mtlocalmoran.R,
R/nb2listw.R, R/p.adjustSP.R, R/read.gal.R, R/subset.nb.R:
changed class test to inherits for nb
2008-05-25 21:09 rsbivand
* R/nb2listw.R: tidy spam similar
2008-05-24 19:56 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/kpgm_new.R, R/lag.spsarlm.R,
R/listw2Matrix.R, R/listw2sn.R, R/nb2listw.R, R/spautolm.R:
listw2U and similar.listw in Matrix and spam
2008-05-24 09:06 rsbivand
* R/listw2Matrix.R: first notes on listw2U in Matrix
2008-05-14 20:24 rsbivand
* inst/ChangeLog: removed try() on Matrix logdet; arg to localmoran
2008-05-14 20:24 rsbivand
* ChangeLog: removed try() on Matrix logdet; arg to localmoran
2008-05-14 20:21 rsbivand
* svn2cl.xsl: removed try() on Matrix logdet; arg to localmoran
2008-05-14 20:20 rsbivand
* inst/ChangeLog: removed try() on Matrix logdet; arg to localmoran
2008-05-14 20:19 rsbivand
* inst/ChangeLog: removed try() on Matrix logdet; arg to localmoran
2008-05-14 20:18 rsbivand
* ChangeLog, Changelog, DESCRIPTION, R/localmoran.R,
man/localmoran.Rd, oChangelog: removed try() on Matrix logdet;
arg to localmoran
2008-04-27 16:57 rsbivand
* DESCRIPTION, R/spautolm.R, man/spautolm.Rd:
2008-04-26 20:46 rsbivand
* Changelog, DESCRIPTION, INDEX, LICENCE, NAMESPACE, data, inst,
src:
2008-04-26 20:45 rsbivand
* man/COL.OLD.Rd, man/EBImoran.mc.Rd, man/EBest.Rd, man/EBlocal.Rd,
man/GMerrorsar.Rd, man/LR.sarlm.Rd, man/ME.Rd, man/NY_data.Rd,
man/SpatialFiltering.Rd, man/afcon.Rd, man/airdist.Rd,
man/anova.sarlm.Rd, man/as_dgRMatrix_listw.Rd, man/auckland.Rd,
man/autocov_dist.Rd, man/baltimore.Rd, man/boston.Rd,
man/bptest.sarlm.Rd, man/card.Rd, man/cell2nb.Rd,
man/choynowski.Rd, man/columbus.Rd, man/compon.Rd, man/diffnb.Rd,
man/dnearneigh.Rd, man/droplinks.Rd, man/edit.nb.Rd,
man/eigenw.Rd, man/eire.Rd, man/errorsarlm.Rd, man/geary.Rd,
man/geary.mc.Rd, man/geary.test.Rd, man/getisord.Rd,
man/globalG.test.Rd, man/graphneigh.Rd, man/hopkins.Rd,
man/huddersfield.Rd, man/include.self.Rd, man/invIrM.Rd,
man/joincount.mc.Rd, man/joincount.multi.Rd,
man/joincount.test.Rd, man/knearneigh.Rd, man/knn2nb.Rd,
man/lag.listw.Rd, man/lagsarlm.Rd, man/listw2sn.Rd,
man/lm.LMtests.Rd, man/lm.morantest.Rd,
man/lm.morantest.exact.Rd, man/lm.morantest.sad.Rd,
man/localG.Rd, man/localmoran.Rd, man/localmoran.exact.Rd,
man/localmoran.sad.Rd, man/mat2listw.Rd, man/moran.Rd,
man/moran.mc.Rd, man/moran.plot.Rd, man/moran.test.Rd,
man/nb2WB.Rd, man/nb2blocknb.Rd, man/nb2lines.Rd,
man/nb2listw.Rd, man/nb2mat.Rd, man/nbdists.Rd, man/nblag.Rd,
man/nboperations.Rd, man/nc.sids.Rd, man/p.adjustSP.Rd,
man/plot.nb.Rd, man/poly2nb.Rd, man/predict.sarlm.Rd,
man/probmap.Rd, man/read.gal.Rd, man/read.gwt2nb.Rd,
man/residuals.sarlm.Rd, man/set.spChkOption.Rd,
man/similar.listw.Rd, man/sp.correlogram.Rd, man/sp.mantel.mc.Rd,
man/spautolm.Rd, man/spdep.Rd, man/spweights.constants.Rd,
man/stsls.Rd, man/subset.listw.Rd, man/subset.nb.Rd,
man/summary.nb.Rd, man/summary.sarlm.Rd, man/testnb.Rd,
man/tri2nb.Rd, man/used.cars.Rd, man/write.nb.gal.Rd:
2008-04-26 19:50 rsbivand
* R/AAA.R, R/EBI.R, R/LR.spsarlm.R, R/ME.R, R/SpatialFiltering.R,
R/airdist.R, R/anova.sarlm.R, R/autocov.R, R/bptest.sarlm.R,
R/card.R, R/cellneighbours.R, R/choynowski.R, R/components.R,
R/diffnb.R, R/dnearneigh.R, R/droplinks.R, R/edit.nb.R,
R/eigenw.R, R/error.spsarlm.R, R/gabrielneigh.R, R/geary.R,
R/globalG.R, R/graph2nb.R, R/jc.R, R/knearneigh.R, R/knn2nb.R,
R/kpgm_new.R, R/lag.spsarlm.R, R/listw2Matrix.R, R/listw2sn.R,
R/lm.LMtests.R, R/lm.morantest.R, R/localG.R, R/localmoran.R,
R/localmoran.exact.R, R/moran.R, R/moran.exact.R,
R/moran.exact.alt.R, R/moran.plot.R, R/mtlocalmoran.R,
R/mtmoran.R, R/nb2blocknb.R, R/nb2lines.R, R/nb2listw.R,
R/nb2mat.R, R/nbdists.R, R/nblag.R, R/nboperations.R,
R/p.adjustSP.R, R/plot.nb.R, R/poly2nb.R, R/read.gal.R,
R/read.gwt2nb.R, R/relneigh.R, R/s2sls.R, R/sarlm.R, R/soi.R,
R/sp.correlogram.R, R/sp.mantel.R, R/spChkOption.R, R/spautolm.R,
R/subset.nb.R, R/summary.nb.R, R/summary.spsarlm.R, R/tri2nb.R,
R/utils.R, R/weights-utils.R:
2007-06-25 10:38 stefan7th
* ., R, man: Email in Readme changed
2008-04-22 09:17 rsbivand
* man/: errorsarlm.Rd, globalG.test.Rd, lagsarlm.Rd: final tidy
2008-03-25 13:21 rsbivand
* ChangeLog, R/lag.spsarlm.R, inst/ChangeLog, man/lagsarlm.Rd:
Matrix
2008-03-25 12:28 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/kpgm_new.R, R/lag.spsarlm.R,
R/spautolm.R, man/GMerrorsar.Rd, man/as_dgRMatrix_listw.Rd,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/similar.listw.Rd,
man/spautolm.Rd: Matrix
2008-03-25 10:41 rsbivand
* R/spautolm.R, man/spautolm.Rd: Matrix
2008-03-23 01:42 rsbivand
* R/spautolm.R, man/spautolm.Rd: Matrix
2008-03-18 16:19 rsbivand
* DESCRIPTION, R/ME.R, R/error.spsarlm.R, R/kpgm_new.R,
R/lag.spsarlm.R, R/spautolm.R, man/GMerrorsar.Rd,
man/as_dgRMatrix_listw.Rd, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/nc.sids.Rd, man/spautolm.Rd: Matrix
2008-03-15 14:15 rsbivand
* DESCRIPTION, NAMESPACE, R/error.spsarlm.R, R/kpgm_new.R,
R/lag.spsarlm.R, R/listw2Matrix.R, R/spautolm.R,
man/as_dgRMatrix_listw.Rd: Matrix patch
2008-03-14 16:31 rsbivand
* ChangeLog, DESCRIPTION, R/listw2Matrix.R,
man/as_dgRMatrix_listw.Rd: Matrix
2008-03-13 14:11 rsbivand
* ChangeLog, DESCRIPTION, R/error.spsarlm.R, R/kpgm_new.R,
R/lag.spsarlm.R, R/listw2Matrix.R, R/spautolm.R, inst/ChangeLog,
man/as_dgRMatrix_listw.Rd: Matrix coercion
2008-02-18 16:57 rsbivand
* DESCRIPTION: release
2008-02-16 17:32 rsbivand
* ChangeLog, R/kpgm_new.R, R/nb2listw.R, R/weights-utils.R,
inst/ChangeLog, man/GMerrorsar.Rd, man/testnb.Rd, src/gsymtest.c:
big symmetric fuzz
2008-02-09 13:41 rsbivand
* DESCRIPTION, man/geary.mc.Rd, man/geary.test.Rd,
man/globalG.test.Rd, man/joincount.multi.Rd,
man/joincount.test.Rd, man/moran.test.Rd,
man/spweights.constants.Rd: adjust n
2008-02-09 10:58 rsbivand
* R/jc.R: n adjust
2008-02-09 10:51 rsbivand
* R/: geary.R, globalG.R, jc.R, moran.R, utils.R: test warnings fix
2008-02-08 00:42 rsbivand
* R/: EBI.R, geary.R, globalG.R, jc.R, lm.LMtests.R,
lm.morantest.R, moran.R, moran.exact.R, mtmoran.R, sp.mantel.R:
test warnings fix
2008-01-15 19:12 rsbivand
* DESCRIPTION, R/mtmoran.R, man/lm.morantest.sad.Rd,
man/localmoran.exact.Rd, man/localmoran.sad.Rd: power
2008-01-15 13:18 rsbivand
* R/moran.exact.R, R/moran.exact.alt.R, R/mtlocalmoran.R,
R/mtmoran.R, man/lm.morantest.exact.Rd: power
2008-01-11 21:37 rsbivand
* ChangeLog, R/localmoran.exact.R, R/moran.exact.R,
R/moran.exact.alt.R, R/mtlocalmoran.R, R/mtmoran.R,
inst/ChangeLog: exact
2008-01-09 08:43 rsbivand
* DESCRIPTION, R/moran.exact.R, R/poly2nb.R: more exact
2008-01-05 15:46 rsbivand
* R/: AAA.R, ME.R, error.spsarlm.R, lag.spsarlm.R, spautolm.R: spam
2007-12-29 16:43 rsbivand
* DESCRIPTION, NAMESPACE, R/AAA.R, R/zzz.R: spam
2007-12-28 17:48 rsbivand
* DESCRIPTION, INDEX, NAMESPACE, R/anova.sarlm.R,
R/error.spsarlm.R, R/kpgm_new.R, R/lag.spsarlm.R, R/listw2cs.R,
R/listw2sn.R, R/spautolm.R, man/asMatrixCsrListw.Rd,
man/as_dgRMatrix_listw.Rd, man/boston.Rd, man/eigenw.Rd,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/listw2sn.Rd,
man/similar.listw.Rd, man/spautolm.Rd, ChangeLog, inst/ChangeLog:
spam transition
2007-12-12 09:43 rsbivand
* R/kpgm_new.R, man/GMerrorsar.Rd: vv
2007-12-11 17:11 rsbivand
* R/spautolm.R, man/spautolm.Rd: llprof
2007-12-09 21:14 rsbivand
* R/moran.exact.R, R/mtmoran.R, man/localmoran.exact.Rd: exact
2007-12-06 09:36 rsbivand
* R/moran.exact.R, R/mtmoran.R, man/joincount.test.Rd,
man/lm.morantest.exact.Rd, man/moran.exact.Rd, NAMESPACE: add
exact
2007-11-30 19:34 rsbivand
* R/localmoran.exact.R, R/moran.exact.R, R/moran.exact.alt.R,
man/compon.Rd, man/graphneigh.Rd, man/moran.exact.Rd,
man/nboperations.Rd: exact moran
2007-11-27 20:21 rsbivand
* R/: moran.exact.alt.R, mtlocalmoran.R: add exact
2007-11-27 17:45 rsbivand
* R/mtmoran.R, man/lm.morantest.sad.Rd: add exact
2007-11-27 17:19 rsbivand
* R/: kpgm_new.R, mtmoran.R: add exact
2007-11-27 16:10 rsbivand
* ChangeLog, DESCRIPTION, NAMESPACE, R/localmoran.exact.R,
R/moran.exact.R, R/moran.exact.alt.R, R/mtlocalmoran.R,
R/mtmoran.R, inst/ChangeLog, man/lm.morantest.sad.Rd,
man/localmoran.exact.Rd, man/localmoran.sad.Rd,
man/moran.exact.Rd: adding Moran exact
2007-11-01 10:45 rsbivand
* ChangeLog, DESCRIPTION, R/SpatialFiltering.R, R/geary.R,
R/moran.R, R/mtlocalmoran.R, R/mtmoran.R, R/sp.mantel.R,
inst/ChangeLog, man/SpatialFiltering.Rd, man/bptest.sarlm.Rd,
man/diffnb.Rd, man/geary.Rd, man/geary.mc.Rd, man/geary.test.Rd,
man/globalG.test.Rd, man/joincount.test.Rd, man/lag.listw.Rd,
man/moran.Rd, man/moran.mc.Rd, man/moran.test.Rd, man/plot.nb.Rd,
man/sp.mantel.mc.Rd, man/spweights.constants.Rd: OSX issue
2007-10-09 10:32 rsbivand
* DESCRIPTION, R/lm.LMtests.R, R/lm.morantest.R, R/spautolm.R,
man/COL.OLD.Rd, man/afcon.Rd, man/auckland.Rd, man/boston.Rd,
man/columbus.Rd, man/eire.Rd, man/getisord.Rd, man/lm.LMtests.Rd,
man/lm.morantest.Rd, man/nc.sids.Rd, man/spautolm.Rd,
man/used.cars.Rd: non_function
2007-07-25 10:50 rsbivand
* DESCRIPTION, R/utils.R: lag.listw warning
2007-06-13 10:36 rsbivand
* R/globalG.R: globalG
2007-06-12 15:38 rsbivand
* R/nb2mat.R, man/spautolm.Rd: inherit in nb2mat
2007-06-11 10:05 rsbivand
* DESCRIPTION: encoding
2007-06-10 22:35 rsbivand
* DESCRIPTION, R/EBI.R, R/anova.sarlm.R, R/geary.R, R/jc.R,
R/moran.R, R/nb2lines.R, R/sp.mantel.R, man/nb2lines.Rd,
man/sp.mantel.mc.Rd, ChangeLog, inst/ChangeLog: SMA, moran.mc,
nb.comp
2007-06-03 21:28 rsbivand
* R/weights-utils.R: n.comp.nb and make.sym.nb fix
2007-05-16 09:23 rsbivand
* DESCRIPTION, R/spautolm.R, man/spautolm.Rd: SMA
2007-05-15 09:42 rsbivand
* R/ME.R, man/GMerrorsar.Rd, man/ME.Rd, man/SpatialFiltering.Rd,
man/autocov_dist.Rd, man/errorsarlm.Rd, man/geary.mc.Rd,
man/globalG.test.Rd, man/invIrM.Rd, man/joincount.mc.Rd,
man/joincount.multi.Rd, man/joincount.test.Rd,
man/lm.morantest.Rd, man/lm.morantest.sad.Rd, man/localmoran.Rd,
man/localmoran.sad.Rd, man/moran.mc.Rd, man/moran.test.Rd,
man/nb2blocknb.Rd, man/p.adjustSP.Rd, man/plot.nb.Rd,
man/poly2nb.Rd, man/predict.sarlm.Rd, man/sp.correlogram.Rd,
man/spautolm.Rd, man/stsls.Rd, man/summary.nb.Rd: line breaks
2007-03-26 22:37 rsbivand
* R/SpatialFiltering.R: to 4.2
2007-03-26 15:43 rsbivand
* DESCRIPTION, R/SpatialFiltering.R, R/nb2listw.R: to 4.2
2007-03-22 10:29 rsbivand
* DESCRIPTION, INDEX, man/bptest.sarlm.Rd: status Matrix
2007-03-21 22:09 rsbivand
* R/nb2mat.R, man/invIrM.Rd: status Matrix
2007-03-21 20:09 rsbivand
* R/kpgm_new.R: status Matrix
2007-03-21 19:46 rsbivand
* DESCRIPTION, R/error.spsarlm.R, R/lag.spsarlm.R, R/spautolm.R:
status Matrix
2007-03-21 19:16 rsbivand
* R/error.spsarlm.R, R/lag.spsarlm.R, R/spautolm.R,
man/asMatrixCsrListw.Rd, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/spautolm.Rd: status Matrix
2007-03-21 18:20 rsbivand
* DESCRIPTION, NAMESPACE, R/ME.R, R/error.spsarlm.R,
R/lag.spsarlm.R, R/listw2cs.R, R/spautolm.R, man/listw2sn.Rd,
man/similar.listw.Rd: status Matrix
2007-03-21 12:47 rsbivand
* DESCRIPTION, R/kpgm_new.R, R/spautolm.R, man/asMatrixCsrListw.Rd,
man/boston.Rd, man/errorsarlm.Rd, man/lagsarlm.Rd,
man/spautolm.Rd: status Matrix
2007-02-12 18:46 rsbivand
* inst/etc/weights/: columbus.gal, ncCC89.gal, ncCR85.gal: missing
GAL files
2007-02-12 14:03 rsb
* inst/etc/misc/: nc_xtra.dbf, nyadjwts.dbf, nydata.dbf: tidy
2007-02-12 13:56 rsb
* DESCRIPTION, NAMESPACE, R/autocov.R, R/dnearneigh.R,
R/error.spsarlm.R, R/knearneigh.R, R/nbdists.R, R/nblag.R,
R/poly2nb.R, R/sarlm.R, R/summary.nb.R, data/oldcol.rda,
inst/CHANGES, man/COL.OLD.Rd, man/EBImoran.mc.Rd, man/EBest.Rd,
man/EBlocal.Rd, man/GMerrorsar.Rd, man/LR.sarlm.Rd, man/ME.Rd,
man/NY_data.Rd, man/SpatialFiltering.Rd, man/afcon.Rd,
man/anova.sarlm.Rd, man/as_dgRMatrix_listw.Rd, man/auckland.Rd,
man/autocov_dist.Rd, man/bptest.sarlm.Rd, man/card.Rd,
man/choynowski.Rd, man/columbus.Rd, man/compon.Rd, man/diffnb.Rd,
man/dnearneigh.Rd, man/eire.Rd, man/geary.mc.Rd,
man/geary.test.Rd, man/globalG.test.Rd, man/graphneigh.Rd,
man/include.self.Rd, man/joincount.test.Rd, man/knearneigh.Rd,
man/knn2nb.Rd, man/listw2sn.Rd, man/lm.morantest.Rd,
man/lm.morantest.sad.Rd, man/localG.Rd, man/localmoran.Rd,
man/localmoran.sad.Rd, man/mat2listw.Rd, man/moran.Rd,
man/moran.mc.Rd, man/moran.plot.Rd, man/moran.test.Rd,
man/nb2WB.Rd, man/nb2lines.Rd, man/nb2listw.Rd, man/nb2mat.Rd,
man/nbdists.Rd, man/nblag.Rd, man/nboperations.Rd,
man/nc.sids.Rd, man/p.adjustSP.Rd, man/plot.nb.Rd,
man/poly2nb.Rd, man/probmap.Rd, man/read.gwt2nb.Rd,
man/residuals.sarlm.Rd, man/sp.correlogram.Rd,
man/sp.mantel.mc.Rd, man/spautolm.Rd, man/subset.listw.Rd,
man/subset.nb.Rd, man/summary.nb.Rd, man/testnb.Rd,
man/tri2nb.Rd, man/used.cars.Rd, man/write.nb.gal.Rd,
inst/etc/shapes/auckland.dbf, inst/etc/shapes/auckland.shp,
inst/etc/shapes/auckland.shx, inst/etc/shapes/columbus.dbf,
inst/etc/shapes/columbus.shp, inst/etc/shapes/columbus.shx,
inst/etc/shapes/eire.dbf, inst/etc/shapes/eire.shp,
inst/etc/shapes/eire.shx, inst/etc/shapes/sids.dbf,
inst/etc/shapes/sids.shp, inst/etc/shapes/sids.shx: tidy
2007-02-07 22:07 rsb
* man/similar.listw.Rd: status for export; Matrix
2007-02-07 21:58 rsb
* R/listw2Matrix.R, man/as_dgRMatrix_listw.Rd, man/nb2WB.Rd,
src/listw2Matrix.c: status for export; Matrix
2007-02-07 20:35 rsb
* DESCRIPTION, INDEX, NAMESPACE, R/airdist.R, R/card.R,
R/cellneighbours.R, R/diffnb.R, R/dnearneigh.R, R/droplinks.R,
R/edit.nb.R, R/error.spsarlm.R, R/gabrielneigh.R, R/geary.R,
R/graph2nb.R, R/jc.R, R/knearneigh.R, R/knn2nb.R,
R/lag.spsarlm.R, R/listw2cs.R, R/listw2sn.R, R/lm.LMtests.R,
R/lm.morantest.R, R/localG.R, R/localmoran.R, R/mtlocalmoran.R,
R/nb2blocknb.R, R/nb2listw.R, R/nb2mat.R, R/nbdists.R, R/nblag.R,
R/nboperations.R, R/poly2nb.R, R/read.gal.R, R/read.gwt2nb.R,
R/relneigh.R, R/soi.R, R/spautolm.R, R/subset.nb.R,
R/summary.spsarlm.R, R/tri2nb.R, R/utils.R, R/weights-utils.R,
inst/CHANGES, man/EBImoran.mc.Rd, man/errorsarlm.Rd,
man/joincount.multi.Rd, man/joincount.test.Rd, man/lagsarlm.Rd,
man/lm.LMtests.Rd, man/localmoran.sad.Rd, man/spautolm.Rd,
man/spweights.constants.Rd: status for export; Matrix
2006-03-10 13:55 rsb
* R/ME.R, R/s2sls.R, data/huddersfield.rda, man/ME.Rd,
man/huddersfield.Rd, man/stsls.Rd: at 3-22
2006-03-10 13:49 rsb
* DESCRIPTION, NAMESPACE, R/EBI.R, R/lm.LMtests.R, inst/CHANGES,
man/EBest.Rd, man/GMerrorsar.Rd, man/errorsarlm.Rd,
man/lagsarlm.Rd, man/lm.LMtests.Rd, man/predict.sarlm.Rd,
man/spautolm.Rd: at 3-22
2006-03-01 09:49 rsb
* DESCRIPTION, INDEX, R/SpatialFiltering.R, R/error.spsarlm.R,
R/jc.R, R/lag.spsarlm.R, R/sarlm.R, R/sp.correlogram.R,
R/spautolm.R, data/auckland.rda, data/columbus.rda,
data/eire.rda, data/nc.sids.rda, data/oldcol.rda, inst/CHANGES,
man/SpatialFiltering.Rd, man/autocov_dist.Rd, man/errorsarlm.Rd,
man/lagsarlm.Rd, man/lm.morantest.Rd, man/read.gal.Rd,
man/sp.correlogram.Rd, man/spautolm.Rd: current
2005-12-14 21:39 rsb
* NAMESPACE, R/SpatialFiltering.R, R/error.spsarlm.R, R/kpgm_new.R,
R/spautolm.R: SpatialFiltering
2005-12-14 13:20 rsb
* man/SpatialFiltering.Rd: SpatialFiltering
2005-12-14 12:53 rsb
* DESCRIPTION, LICENCE, NAMESPACE, R/SpatialFiltering.R,
inst/LICENCE, man/SpatialFiltering.Rd, inst/CHANGES:
SpatialFiltering
2005-12-13 09:35 rsb
* DESCRIPTION, LICENCE, inst/LICENCE: new functions
2005-12-13 09:23 rsb
* R/autocov.R, R/choynowski.R, R/kpgm_new.R, R/nb2blocknb.R,
R/nb2lines.R, R/p.adjustSP.R, R/spautolm.R, data/NY_data.rda,
data/hopkins.rda, man/GMerrorsar.Rd, man/NY_data.Rd,
man/asMatrixCsrListw.Rd, man/autocov_dist.Rd, man/choynowski.Rd,
man/hopkins.Rd, man/joincount.multi.Rd, man/nb2blocknb.Rd,
man/nb2lines.Rd, man/p.adjustSP.Rd, man/spautolm.Rd,
src/gearyw.c, src/gsymtest.c, src/insiders.c, src/polypoly.c: new
functions
2005-12-13 09:10 rsb
* DESCRIPTION, NAMESPACE, R/bptest.sarlm.R, R/lm.morantest.R,
R/mtmoran.R, R/poly2nb.R, man/bptest.sarlm.Rd, man/poly2nb.Rd:
new functions
2005-11-29 15:50 rsb
* DESCRIPTION, INDEX, NAMESPACE, R/anova.sarlm.R, R/diffnb.R,
R/droplinks.R, R/error.spsarlm.R, R/gabrielneigh.R, R/jc.R,
R/lag.spsarlm.R, R/listw2cs.R, R/lm.LMtests.R, R/lm.morantest.R,
R/moran.R, R/mtlocalmoran.R, R/mtmoran.R, R/nb2listw.R,
R/plot.nb.R, R/poly2nb.R, R/read.gal.R, R/read.gwt2nb.R,
R/relneigh.R, R/subset.nb.R, R/summary.spsarlm.R, R/tri2nb.R,
R/utils.R, R/zzz.R, inst/doc/sids.Rnw, man/EBImoran.mc.Rd,
man/bptest.sarlm.Rd, man/eire.Rd, man/errorsarlm.Rd,
man/lagsarlm.Rd, man/moran.mc.Rd, man/nb2listw.Rd,
man/plot.nb.Rd, man/tri2nb.Rd: Kohren Sahlis etc
2005-01-20 19:57 rsb
* DESCRIPTION, INDEX, LICENCE, NAMESPACE, R/EBI.R,
R/cellneighbours.R, R/diffnb.R, R/dnearneigh.R, R/droplinks.R,
R/error.spsarlm.R, R/geary.R, R/graph2nb.R, R/jc.R,
R/knearneigh.R, R/knn2nb.R, R/lag.spsarlm.R, R/listw2cs.R,
R/listw2sn.R, R/lm.LMtests.R, R/lm.morantest.R, R/localmoran.R,
R/moran.R, R/mtlocalmoran.R, R/mtmoran.R, R/nb2listw.R,
R/nb2mat.R, R/nblag.R, R/nboperations.R, R/plot.nb.R,
R/poly2nb.R, R/read.gal.R, R/read.gwt2nb.R, R/sp.correlogram.R,
R/sp.mantel.R, R/spwdet.R, R/subset.nb.R, R/weights-utils.R,
data/eire.rda, data/used.cars.rda, inst/LICENCE,
inst/doc/sids.Rnw, man/boston.Rd, man/errorsarlm.Rd,
man/lagsarlm.Rd, man/listw2sn.Rd, man/lm.morantest.Rd,
man/lm.morantest.sad.Rd, man/localmoran.sad.Rd, man/testnb.Rd,
man/used.cars.Rd: sp out
2005-01-20 19:18 rsb
* src/: spAllocate.c, spBuild.c, spConfig.h, spDefs.h, spFactor.c,
spMatrix.h, spUtils.c, spwdet.c: sp out
2004-11-01 18:51 rsb
* DESCRIPTION, R/dnearneigh.R, R/listw2sn.R, R/read.gal.R,
R/summary.nb.R, inst/doc/sids.Rnw, man/read.gal.Rd: pre lancs
2004-08-17 11:26 rsb
* DESCRIPTION, R/knearneigh.R, R/summary.nb.R, R/utils.R,
data/nc.sids.rda, inst/doc/sids.Rnw, man/EBImoran.mc.Rd,
man/LR.sarlm.Rd, man/moran.mc.Rd, man/nc.sids.Rd: roundup
2004-05-19 08:11 rsb
* DESCRIPTION, INDEX, NAMESPACE, R/error.spsarlm.R,
R/lag.spsarlm.R, R/listw2sn.R, R/localmoran.R, R/poly2nb.R,
R/read.gwt2nb.R, R/sarlm.R, R/summary.spsarlm.R, R/tri2nb.R,
R/zzz.R, data/auckland.rda, data/columbus.rda, data/eire.rda,
data/oldcol.rda, inst/doc/sids.Rnw, inst/etc/weights/wmat.dat,
man/EBest.Rd, man/EBlocal.Rd, man/diffnb.Rd, man/dnearneigh.Rd,
man/eire.Rd, man/graphneigh.Rd, man/knearneigh.Rd, man/knn2nb.Rd,
man/lag.listw.Rd, man/localmoran.Rd, man/localmoran.sad.Rd,
man/nblag.Rd, man/nboperations.Rd, man/nc.sids.Rd,
man/poly2nb.Rd, man/probmap.Rd, man/read.gwt2nb.Rd,
man/tri2nb.Rd: changes to 2-17
2004-03-27 21:05 rsb
* DESCRIPTION, INDEX, NAMESPACE, R/EBI.R, R/anova.sarlm.R,
R/edit.nb.R, R/error.spsarlm.R, R/geary.R, R/globalG.R, R/jc.R,
R/lag.spsarlm.R, R/listw2sn.R, R/lm.LMtests.R, R/lm.morantest.R,
R/localmoran.R, R/moran.R, R/mtlocalmoran.R, R/mtmoran.R,
R/poly2nb.R, R/read.gal.R, R/read.gwt2nb.R, R/sarlm.R,
R/sp.mantel.R, R/spwdet.R, R/subset.nb.R, R/summary.nb.R,
R/summary.spsarlm.R, R/utils.R, R/weights-utils.R,
data/auckland.rda, data/columbus.rda, data/eire.rda,
data/nc.sids.rda, data/oldcol.rda, data/used.cars.rda,
inst/doc/00Index.dcf, inst/doc/sids.Rnw, man/COL.OLD.Rd,
man/EBImoran.mc.Rd, man/EBest.Rd, man/EBlocal.Rd,
man/LR.sarlm.Rd, man/auckland.Rd, man/columbus.Rd, man/diffnb.Rd,
man/dnearneigh.Rd, man/edit.nb.Rd, man/eigenw.Rd, man/eire.Rd,
man/errorsarlm.Rd, man/geary.mc.Rd, man/geary.test.Rd,
man/globalG.test.Rd, man/graphneigh.Rd, man/joincount.mc.Rd,
man/joincount.test.Rd, man/knearneigh.Rd, man/knn2nb.Rd,
man/lag.listw.Rd, man/lagsarlm.Rd, man/listw2sn.Rd,
man/lm.morantest.Rd, man/lm.morantest.sad.Rd, man/localmoran.Rd,
man/localmoran.sad.Rd, man/moran.Rd, man/moran.mc.Rd,
man/moran.test.Rd, man/nblag.Rd, man/nboperations.Rd,
man/nc.sids.Rd, man/poly2nb.Rd, man/probmap.Rd, man/read.gal.Rd,
man/read.gwt2nb.Rd, man/residuals.sarlm.Rd, man/sp.mantel.mc.Rd,
man/spweights.constants.Rd, man/subset.listw.Rd,
man/summary.sarlm.Rd, man/tri2nb.Rd, man/used.cars.Rd, src/jc.c,
src/lagw.c, src/listw2sn.c, R/bptest.sarlm.R,
man/bptest.sarlm.Rd: after AAG
2003-09-12 18:28 rsb
* man/: joincount.mc.Rd, joincount.test.Rd: 2.4 fixes
2003-09-12 18:24 rsb
* DESCRIPTION, INDEX, NAMESPACE, R/diffnb.R, R/dnearneigh.R,
R/graph2nb.R, R/knn2nb.R, R/listw2sn.R, R/nb2mat.R, R/poly2nb.R,
R/read.gal.R, R/sp.correlogram.R, R/summary.nb.R,
R/summary.spsarlm.R, R/tri2nb.R, data/nc.sids.rda,
inst/doc/00Index.dcf, inst/doc/sids.Rnw, inst/doc/spdep.Rnw,
inst/doc/spdep.pdf, man/EBImoran.mc.Rd, man/dnearneigh.Rd,
man/errorsarlm.Rd, man/geary.Rd, man/joincount.Rd,
man/knearneigh.Rd, man/lagsarlm.Rd, man/lm.LMtests.Rd,
man/mat2listw.Rd, man/nc.sids.Rd, man/poly2nb.Rd,
man/sp.correlogram.Rd, src/dnn.c: 2.4 fixes
2003-08-27 10:01 rsb
* DESCRIPTION, INDEX, R/LR.spsarlm.R, R/geary.R, R/jc.R,
R/lm.morantest.R, R/moran.R, R/moran.plot.R, R/mtlocalmoran.R,
R/mtmoran.R, R/plot.nb.R, R/poly2nb.R, R/utils.R,
R/weights-utils.R, R/zzz.R, inst/doc/spdep.Rnw,
inst/doc/spdep.pdf, man/EBest.Rd, man/EBlocal.Rd,
man/Map2poly.Rd, man/columbus.Rd, man/diffnb.Rd, man/eire.Rd,
man/graphneigh.Rd, man/knearneigh.Rd, man/knn2nb.Rd,
man/moran.plot.Rd, man/nblag.Rd, man/nboperations.Rd,
man/nc.sids.Rd, man/plotpolys.Rd, man/poly2nb.Rd, man/probmap.Rd,
man/read.gwt2nb.Rd, man/spdep.Rd, man/tri2nb.Rd, NAMESPACE: pre
2-2
2003-08-07 22:22 rsb
* man/: Map2poly.Rd, anova.sarlm.Rd, baltimore.Rd, read.gwt2nb.Rd,
sp.mantel.mc.Rd: at 0.1-13
2003-08-07 22:18 rsb
* inst/doc/00Index.dcf, inst/doc/spdep.Rnw, inst/doc/spdep.pdf,
inst/etc/weights/baltk4.GWT, inst/etc/weights/us48.txt,
inst/etc/weights/us48_q.GAL, inst/etc/weights/us48_rk.GAL,
data/baltimore.rda: at 0.1-13
2003-08-07 22:15 rsb
* R/: anova.sarlm.R, sp.mantel.R: at 0.1-13
2003-08-07 22:11 rsb
* DESCRIPTION, INDEX, R/EBI.R, R/LR.spsarlm.R, R/card.R,
R/diffnb.R, R/dnearneigh.R, R/edit.nb.R, R/eigenw.R,
R/error.spsarlm.R, R/geary.R, R/globalG.R, R/jc.R,
R/knearneigh.R, R/lag.spsarlm.R, R/listw2sn.R, R/lm.LMtests.R,
R/lm.morantest.R, R/moran.R, R/mtlocalmoran.R, R/mtmoran.R,
R/nb2listw.R, R/nbdists.R, R/plot.nb.R, R/poly2nb.R,
R/read.gal.R, R/sp.correlogram.R, R/summary.nb.R,
R/summary.spsarlm.R, R/utils.R, R/weights-utils.R, R/zzz.R,
data/00Index, data/BH.rda, data/eire.rda, data/nc.sids.rda,
man/BH.Rd, man/COL.OLD.Rd, man/EBImoran.mc.Rd, man/EBest.Rd,
man/EBlocal.Rd, man/LR.sarlm.Rd, man/afcon.Rd, man/columbus.Rd,
man/diffnb.Rd, man/dnearneigh.Rd, man/eire.Rd, man/geary.test.Rd,
man/joincount.test.Rd, man/knearneigh.Rd, man/listw2sn.Rd,
man/lm.LMtests.Rd, man/moran.test.Rd, man/nb2listw.Rd,
man/nbdists.Rd, man/nc.sids.Rd, man/plot.nb.Rd, man/plotpolys.Rd,
man/poly2nb.Rd, man/probmap.Rd, man/read.gal.Rd,
man/sp.correlogram.Rd, man/spweights.constants.Rd,
man/summary.nb.Rd, man/write.nb.gal.Rd, src/dnn.c, src/knn.c,
src/nbdists.c: at 0.1-13
2003-04-26 16:19 rsb
* R/LR.spsarlm.R, R/graph2nb.R, R/nb2listw.R, R/nboperations.R,
R/read.gal.R, R/weights-utils.R, man/EBest.Rd, man/EBlocal.Rd,
man/probmap.Rd: EB and inherits
2003-04-23 23:03 rsb
* DESCRIPTION, INDEX, LICENCE, R/EBI.R, R/dnearneigh.R, R/eigenw.R,
R/error.spsarlm.R, R/geary.R, R/globalG.R, R/jc.R,
R/knearneigh.R, R/listw2sn.R, R/lm.LMtests.R, R/lm.morantest.R,
R/localG.R, R/localmoran.R, R/moran.R, R/moran.plot.R,
R/mtmoran.R, R/nb2listw.R, R/nb2mat.R, R/poly2nb.R, R/sarlm.R,
R/spChkOption.R, R/utils.R, data/00Index, data/auckland.rda,
inst/LICENCE, man/EBImoran.mc.Rd, man/EBest.Rd, man/EBlocal.Rd,
man/auckland.Rd, man/moran.test.Rd, man/nc.sids.Rd,
man/plotpolys.Rd, man/poly2nb.Rd, man/probmap.Rd,
man/set.spChkOption.Rd: EB and inherits
2003-01-21 20:32 rsb
* R/EBI.R, R/geary.R, R/globalG.R, R/jc.R, R/lm.LMtests.R,
R/lm.morantest.R, R/localG.R, R/localmoran.R, R/moran.R,
R/moran.plot.R, R/mtlocalmoran.R, R/mtmoran.R,
R/sp.correlogram.R, R/spChkOption.R, R/utils.R, R/zzz.R,
data/nc.sids.rda, data/oldcol.rda, data/used.cars.rda, man/BH.Rd,
man/EBImoran.mc.Rd, man/afcon.Rd, man/eire.Rd, man/geary.mc.Rd,
man/geary.test.Rd, man/globalG.test.Rd, man/joincount.mc.Rd,
man/joincount.test.Rd, man/lm.LMtests.Rd, man/lm.morantest.Rd,
man/lm.morantest.sad.Rd, man/localG.Rd, man/localmoran.Rd,
man/localmoran.sad.Rd, man/moran.mc.Rd, man/moran.plot.Rd,
man/moran.test.Rd, man/nc.sids.Rd, man/set.spChkOption.Rd,
man/sp.correlogram.Rd, man/used.cars.Rd: spChk
2003-01-20 20:33 rsb
* INDEX, R/EBI.R, R/jc.R, data/00Index, man/BH.Rd,
man/EBImoran.mc.Rd, man/joincount.mc.Rd, src/jc.c: jc-update
2003-01-20 12:25 rsb
* DESCRIPTION, LICENCE, R/eigenw.R, R/error.spsarlm.R,
R/lag.spsarlm.R, R/nb2mat.R, inst/LICENCE, man/localmoran.Rd,
R/EBI.R, data/BH.rda, man/BH.Rd, man/EBImoran.mc.Rd: EBI
2002-08-20 09:12 rsb
* DESCRIPTION, INDEX, LICENCE, R/geary.R, R/globalG.R, R/jc.R,
R/moran.R, R/sarlm.R, R/sp.correlogram.R, R/subset.nb.R,
data/boston.rda, inst/LICENCE, man/boston.Rd, man/geary.Rd,
man/geary.mc.Rd, man/globalG.test.Rd, man/joincount.mc.Rd,
man/moran.mc.Rd, man/predict.sarlm.Rd, man/sp.correlogram.Rd,
src/lagw.c, src/spFactor.c, src/spMatrix.h: formats without l
2002-08-06 13:35 rsb
* DESCRIPTION, INDEX, R/error.spsarlm.R, R/geary.R, R/jc.R,
R/lag.spsarlm.R, R/lm.morantest.R, R/localmoran.R, R/moran.R,
R/moran.plot.R, R/mtlocalmoran.R, R/mtmoran.R, R/nb2listw.R,
R/nb2mat.R, R/sarlm.R, R/spwdet.R, R/summary.spsarlm.R,
R/utils.R, data/00Index, man/errorsarlm.Rd, man/invIrM.Rd,
man/lagsarlm.Rd, man/listw2sn.Rd, man/localmoran.sad.Rd,
man/nc.sids.Rd, man/predict.sarlm.Rd, man/residuals.sarlm.Rd,
src/spAllocate.c, src/spConfig.h, src/spDefs.h, src/spwdet.c:
predict
2002-04-15 18:35 rsb
* INDEX, LICENCE, R/diffnb.R, R/geary.R, R/jc.R, R/moran.R,
R/nboperations.R, R/utils.R, data/00Index, data/eire.rda,
data/nc.sids.rda, inst/LICENCE, man/boston.Rd,
man/joincount.test.Rd, man/nc.sids.Rd,
man/spweights.constants.Rd: added sids
2002-04-13 16:12 rsb
* DESCRIPTION, R/lm.LMtests.R, R/lm.morantest.R, R/mtlocalmoran.R,
R/mtmoran.R, R/spwdet.R, data/afcon.rda, data/boston.rda,
data/columbus.rda, data/eire.rda, data/getisord.rda,
data/oldcol.rda, data/used.cars.rda, man/boston.Rd: before SB
2002-03-19 22:50 rsb
* man/listw2sn.Rd: release
2002-03-19 22:27 rsb
* R/LR.spsarlm.R, R/airdist.R, R/card.R, R/cellneighbours.R,
R/components.R, R/diffnb.R, R/dnearneigh.R, R/droplinks.R,
R/edit.nb.R, R/eigenw.R, R/error.spsarlm.R, R/gabrielneigh.R,
R/geary.R, R/graph2nb.R, R/jc.R, R/knearneigh.R, R/knn2nb.R,
R/lag.spsarlm.R, R/listw2sn.R, R/lm.LMtests.R, R/lm.morantest.R,
R/localG.R, R/localmoran.R, R/moran.R, R/moran.plot.R,
R/mtlocalmoran.R, R/mtmoran.R, R/nb2listw.R, R/nb2mat.R,
R/nbdists.R, R/nblag.R, R/nboperations.R, R/plot.nb.R,
R/poly2nb.R, R/read.gal.R, R/relneigh.R, R/soi.R, R/spwdet.R,
R/subset.nb.R, R/summary.nb.R, R/summary.spsarlm.R, R/tri2nb.R,
R/utils.R, R/weights-utils.R, R/zzz.R, src/card.c,
src/dfs_ncomp.c, src/lagw.c, src/listw2sn.c, src/nbdists.c,
src/relative.c, src/soigraph.c, src/spwdet.c, src/symtest.c,
LICENCE, inst/LICENCE: release
2002-03-19 13:05 rsb
* DESCRIPTION, R/error.spsarlm.R, R/lag.spsarlm.R, R/spwdet.R,
man/errorsarlm.Rd, man/lagsarlm.Rd, man/listw2sn.Rd,
src/spAllocate.c, src/spBuild.c, src/spConfig.h, src/spDefs.h,
src/spFactor.c, src/spMatrix.h, src/spUtils.c, src/spwdet.c:
nearer release
2002-03-17 00:02 rsb
* R/card.R, R/cellneighbours.R, R/components.R, R/dnearneigh.R,
R/edit.nb.R, R/error.spsarlm.R, R/gabrielneigh.R, R/geary.R,
R/knearneigh.R, R/lag.spsarlm.R, R/listw2sn.R, R/lm.LMtests.R,
R/localmoran.R, R/moran.R, R/nbdists.R, R/relneigh.R, R/soi.R,
R/summary.nb.R, R/utils.R, R/weights-utils.R, man/afcon.Rd,
man/cell2nb.Rd, man/columbus.Rd, man/compon.Rd, man/diffnb.Rd,
man/dnearneigh.Rd, man/errorsarlm.Rd, man/getisord.Rd,
man/invIrM.Rd, man/knearneigh.Rd, man/knn2nb.Rd,
man/lag.listw.Rd, man/lagsarlm.Rd, man/localG.Rd, man/nblag.Rd,
man/plot.nb.Rd, man/poly2nb.Rd, man/subset.nb.Rd, man/testnb.Rd,
man/tri2nb.Rd, man/used.cars.Rd: release
2002-03-15 23:35 rsb
* DESCRIPTION, INDEX, R/LR.spsarlm.R, R/airdist.R, R/card.R,
R/cellneighbours.R, R/components.R, R/diffnb.R, R/dnearneigh.R,
R/droplinks.R, R/edit.nb.R, R/eigenw.R, R/error.spsarlm.R,
R/gabrielneigh.R, R/geary.R, R/graph2nb.R, R/jc.R,
R/knearneigh.R, R/knn2nb.R, R/lag.spsarlm.R, R/listw2sn.R,
R/lm.LMtests.R, R/lm.morantest.R, R/localG.R, R/localmoran.R,
R/moran.R, R/moran.plot.R, R/mtlocalmoran.R, R/mtmoran.R,
R/nb2listw.R, R/nb2mat.R, R/nbdists.R, R/nblag.R,
R/nboperations.R, R/plot.nb.R, R/poly2nb.R, R/read.gal.R,
R/relneigh.R, R/soi.R, R/subset.nb.R, R/summary.nb.R,
R/summary.spsarlm.R, R/tri2nb.R, R/utils.R, R/weights-utils.R,
R/zzz.R, data/00Index, data/afcon.rda, data/columbus.rda,
data/eire.rda, data/getisord.rda, data/oldcol.rda,
data/used.cars.rda, man/COL.OLD.Rd, man/LR.sarlm.Rd,
man/afcon.Rd, man/airdist.Rd, man/card.Rd, man/cell2nb.Rd,
man/columbus.Rd, man/compon.Rd, man/diffnb.Rd, man/dnearneigh.Rd,
man/droplinks.Rd, man/edit.nb.Rd, man/eigenw.Rd, man/eire.Rd,
man/errorsarlm.Rd, man/geary.Rd, man/geary.mc.Rd,
man/geary.test.Rd, man/getisord.Rd, man/graphneigh.Rd,
man/include.self.Rd, man/invIrM.Rd, man/joincount.Rd,
man/joincount.mc.Rd, man/joincount.test.Rd, man/knearneigh.Rd,
man/knn2nb.Rd, man/lag.listw.Rd, man/lagsarlm.Rd,
man/listw2sn.Rd, man/lm.LMtests.Rd, man/lm.morantest.Rd,
man/lm.morantest.sad.Rd, man/localG.Rd, man/localmoran.Rd,
man/localmoran.sad.Rd, man/moran.Rd, man/moran.mc.Rd,
man/moran.plot.Rd, man/moran.test.Rd, man/nb2listw.Rd,
man/nb2mat.Rd, man/nbdists.Rd, man/nblag.Rd, man/nboperations.Rd,
man/plot.nb.Rd, man/plotpolys.Rd, man/poly2nb.Rd,
man/read.gal.Rd, man/spweights.constants.Rd, man/subset.nb.Rd,
man/summary.nb.Rd, man/summary.sarlm.Rd, man/testnb.Rd,
man/tri2nb.Rd, man/used.cars.Rd, man/write.nb.gal.Rd, src/card.c,
src/dfs_ncomp.c, src/dnn.c, src/gabriel.c, src/knn.c, src/lagw.c,
src/listw2sn.c, src/nbdists.c, src/relative.c, src/soigraph.c,
src/symtest.c: Imported sources
2002-03-15 23:35 rsb
* DESCRIPTION, INDEX, R/LR.spsarlm.R, R/airdist.R, R/card.R,
R/cellneighbours.R, R/components.R, R/diffnb.R, R/dnearneigh.R,
R/droplinks.R, R/edit.nb.R, R/eigenw.R, R/error.spsarlm.R,
R/gabrielneigh.R, R/geary.R, R/graph2nb.R, R/jc.R,
R/knearneigh.R, R/knn2nb.R, R/lag.spsarlm.R, R/listw2sn.R,
R/lm.LMtests.R, R/lm.morantest.R, R/localG.R, R/localmoran.R,
R/moran.R, R/moran.plot.R, R/mtlocalmoran.R, R/mtmoran.R,
R/nb2listw.R, R/nb2mat.R, R/nbdists.R, R/nblag.R,
R/nboperations.R, R/plot.nb.R, R/poly2nb.R, R/read.gal.R,
R/relneigh.R, R/soi.R, R/subset.nb.R, R/summary.nb.R,
R/summary.spsarlm.R, R/tri2nb.R, R/utils.R, R/weights-utils.R,
R/zzz.R, data/00Index, data/afcon.rda, data/columbus.rda,
data/eire.rda, data/getisord.rda, data/oldcol.rda,
data/used.cars.rda, man/COL.OLD.Rd, man/LR.sarlm.Rd,
man/afcon.Rd, man/airdist.Rd, man/card.Rd, man/cell2nb.Rd,
man/columbus.Rd, man/compon.Rd, man/diffnb.Rd, man/dnearneigh.Rd,
man/droplinks.Rd, man/edit.nb.Rd, man/eigenw.Rd, man/eire.Rd,
man/errorsarlm.Rd, man/geary.Rd, man/geary.mc.Rd,
man/geary.test.Rd, man/getisord.Rd, man/graphneigh.Rd,
man/include.self.Rd, man/invIrM.Rd, man/joincount.Rd,
man/joincount.mc.Rd, man/joincount.test.Rd, man/knearneigh.Rd,
man/knn2nb.Rd, man/lag.listw.Rd, man/lagsarlm.Rd,
man/listw2sn.Rd, man/lm.LMtests.Rd, man/lm.morantest.Rd,
man/lm.morantest.sad.Rd, man/localG.Rd, man/localmoran.Rd,
man/localmoran.sad.Rd, man/moran.Rd, man/moran.mc.Rd,
man/moran.plot.Rd, man/moran.test.Rd, man/nb2listw.Rd,
man/nb2mat.Rd, man/nbdists.Rd, man/nblag.Rd, man/nboperations.Rd,
man/plot.nb.Rd, man/plotpolys.Rd, man/poly2nb.Rd,
man/read.gal.Rd, man/spweights.constants.Rd, man/subset.nb.Rd,
man/summary.nb.Rd, man/summary.sarlm.Rd, man/testnb.Rd,
man/tri2nb.Rd, man/used.cars.Rd, man/write.nb.gal.Rd, src/card.c,
src/dfs_ncomp.c, src/dnn.c, src/gabriel.c, src/knn.c, src/lagw.c,
src/listw2sn.c, src/nbdists.c, src/relative.c, src/soigraph.c,
src/symtest.c: Initial revision
spdep/inst/doc/ 0000755 0001751 0000144 00000000000 13034515152 013124 5 ustar hornik users spdep/inst/doc/sids.R 0000644 0001751 0000144 00000043140 13034515152 014213 0 ustar hornik users ### R code from vignette source 'sids.Rnw'
### Encoding: UTF-8
###################################################
### code chunk number 1: sids.Rnw:31-36
###################################################
owidth <- getOption("width")
options("width"=70)
ow <- getOption("warn")
options("warn"=-1)
.PngNo <- 0
###################################################
### code chunk number 2: afig (eval = FALSE)
###################################################
## .PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
## pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
## opar <- par(mar=c(3,3,1,1)+0.1)
###################################################
### code chunk number 3: afigl (eval = FALSE)
###################################################
## .PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
## pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
###################################################
### code chunk number 4: bfigl (eval = FALSE)
###################################################
## .PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
## pdf(file=file, width = 6.5, height = 5, pointsize = 12, bg = "white")
###################################################
### code chunk number 5: zfig (eval = FALSE)
###################################################
## par(opar)
## dev.null <- dev.off()
## cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 6: zfigl (eval = FALSE)
###################################################
## dev.null <- dev.off()
## cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 7: sids.Rnw:77-78
###################################################
library(spdep)
###################################################
### code chunk number 8: sids.Rnw:95-101
###################################################
library(sp)
library(maptools)
library(spdep)
nc_file <- system.file("etc/shapes/sids.shp", package="spdep")[1]
llCRS <- CRS("+proj=longlat +datum=NAD27")
nc <- readShapeSpatial(nc_file, ID="FIPSNO", proj4string=llCRS)
###################################################
### code chunk number 9: plotNC1 (eval = FALSE)
###################################################
## plot(nc, axes=TRUE)
## text(coordinates(nc), label=nc$FIPSNO, cex=0.5)
###################################################
### code chunk number 10: sids.Rnw:123-126
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
opar <- par(mar=c(3,3,1,1)+0.1)
plot(nc, axes=TRUE)
text(coordinates(nc), label=nc$FIPSNO, cex=0.5)
par(opar)
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 11: sids.Rnw:139-141
###################################################
names(nc)
summary(nc)
###################################################
### code chunk number 12: sids.Rnw:151-157
###################################################
gal_file <- system.file("etc/weights/ncCR85.gal", package="spdep")[1]
ncCR85 <- read.gal(gal_file, region.id=nc$FIPSNO)
ncCR85
gal_file <- system.file("etc/weights/ncCC89.gal", package="spdep")[1]
ncCC89 <- read.gal(gal_file, region.id=nc$FIPSNO)
ncCC89
###################################################
### code chunk number 13: plot-CC89.nb (eval = FALSE)
###################################################
## plot(nc, border="grey")
## plot(ncCC89, coordinates(nc), add=TRUE, col="blue")
###################################################
### code chunk number 14: sids.Rnw:170-173
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
opar <- par(mar=c(3,3,1,1)+0.1)
plot(nc, border="grey")
plot(ncCC89, coordinates(nc), add=TRUE, col="blue")
par(opar)
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 15: sids.Rnw:193-197
###################################################
ncCC89
r.id <- attr(ncCC89, "region.id")
ncCC89[[match("37001", r.id)]]
r.id[ncCC89[[match("37001", r.id)]]]
###################################################
### code chunk number 16: sids.Rnw:207-208
###################################################
as.character(nc$NAME)[card(ncCC89) == 0]
###################################################
### code chunk number 17: sids.Rnw:243-249
###################################################
ch <- choynowski(nc$SID74, nc$BIR74)
nc$ch_pmap_low <- ifelse(ch$type, ch$pmap, NA)
nc$ch_pmap_high <- ifelse(!ch$type, ch$pmap, NA)
prbs <- c(0,.001,.01,.05,.1,1)
nc$high = cut(nc$ch_pmap_high, prbs)
nc$low = cut(nc$ch_pmap_low,prbs )
###################################################
### code chunk number 18: sids.Rnw:251-252 (eval = FALSE)
###################################################
## spplot(nc, c("low", "high"), col.regions=grey.colors(5))
###################################################
### code chunk number 19: sids.Rnw:258-261
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
print(spplot(nc, c("low", "high"), col.regions=grey.colors(5)))
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 20: sids.Rnw:285-289
###################################################
pmap <- probmap(nc$SID74, nc$BIR74)
nc$pmap <- pmap$pmap
brks <- c(0,0.001,0.01,0.025,0.05,0.95,0.975,0.99,0.999,1)
library(RColorBrewer)
###################################################
### code chunk number 21: sids.Rnw:291-292 (eval = FALSE)
###################################################
## spplot(nc, "pmap", at=brks, col.regions=rev(brewer.pal(9, "RdBu")))
###################################################
### code chunk number 22: sids.Rnw:298-301
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
print(spplot(nc, "pmap", at=brks, col.regions=rev(brewer.pal(9, "RdBu"))))
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 23: poishist (eval = FALSE)
###################################################
## hist(nc$pmap, main="")
###################################################
### code chunk number 24: sids.Rnw:328-331
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
opar <- par(mar=c(3,3,1,1)+0.1)
hist(nc$pmap, main="")
par(opar)
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 25: sids.Rnw:346-349
###################################################
res <- glm(SID74 ~ offset(log(BIR74)), data=nc, family="quasipoisson")
nc$stdres <- rstandard(res)
brks <- c(-4, -3, -2, -1.5, -1, -0.5, 0.5, 1, 1.5, 2, 3, 4)
###################################################
### code chunk number 26: sids.Rnw:351-352 (eval = FALSE)
###################################################
## spplot(nc, "stdres", at=brks, col.regions=rev(brewer.pal(11, "RdBu")))
###################################################
### code chunk number 27: sids.Rnw:370-373
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
print(spplot(nc, "stdres", at=brks, col.regions=rev(brewer.pal(11, "RdBu"))))
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 28: sids.Rnw:402-408
###################################################
global_rate <- sum(nc$SID74)/sum(nc$BIR74)
nc$Expected <- global_rate * nc$BIR74
res <- EBlocal(nc$SID74, nc$Expected, ncCC89, zero.policy=TRUE)
nc$EB_loc <- res$est
brks <- c(0, 0.25, 0.5, 0.75, 1, 2, 3, 4, 5)
spl <- list("sp.text", loc=coordinates(nc)[card(ncCC89) == 0,], txt=rep("*", 2), cex=1.2)
###################################################
### code chunk number 29: sids.Rnw:410-411 (eval = FALSE)
###################################################
## spplot(nc, "EB_loc", at=brks, col.regions=rev(brewer.pal(8, "RdBu")), sp.layout=spl)
###################################################
### code chunk number 30: sids.Rnw:423-426
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
print(spplot(nc, "EB_loc", at=brks, col.regions=rev(brewer.pal(8, "RdBu")), sp.layout=spl))
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 31: sids.Rnw:438-440
###################################################
set.seed(1)
EBImoran.mc(nc$SID74, nc$BIR74, nb2listw(ncCC89, style="B", zero.policy=TRUE), nsim=999, zero.policy=TRUE)
###################################################
### code chunk number 32: sids.Rnw:454-456
###################################################
nc$both <- factor(paste(nc$L_id, nc$M_id, sep=":"))
nboth <- length(table(unclass(nc$both)))
###################################################
### code chunk number 33: sids.Rnw:458-459 (eval = FALSE)
###################################################
## spplot(nc, "both", col.regions=sample(rainbow(nboth)))
###################################################
### code chunk number 34: sids.Rnw:465-468
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
print(spplot(nc, "both", col.regions=sample(rainbow(nboth))))
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 35: sids.Rnw:478-480
###################################################
nc$ft.SID74 <- sqrt(1000)*(sqrt(nc$SID74/nc$BIR74) + sqrt((nc$SID74+1)/nc$BIR74))
stem(round(nc$ft.SID74, 1), scale=2)
###################################################
### code chunk number 36: sids.Rnw:497-499
###################################################
mBIR74 <- tapply(nc$BIR74, nc$both, sum)
mSID74 <- tapply(nc$SID74, nc$both, sum)
###################################################
### code chunk number 37: sids.Rnw:511-515
###################################################
mFT <- sqrt(1000)*(sqrt(mSID74/mBIR74) + sqrt((mSID74+1)/mBIR74))
mFT1 <- t(matrix(mFT, 4, 4, byrow=TRUE))
med <- medpolish(mFT1, na.rm=TRUE, trace.iter=FALSE)
med
###################################################
### code chunk number 38: sids.Rnw:527-531
###################################################
mL_id <- model.matrix(~ as.factor(nc$L_id) -1)
mM_id <- model.matrix(~ as.factor(nc$M_id) -1)
nc$pred <- c(med$overall + mL_id %*% med$row + mM_id %*% med$col)
nc$mp_resid <- nc$ft.SID74 - nc$pred
###################################################
### code chunk number 39: medpolfig (eval = FALSE)
###################################################
## cI_ft <- pretty(nc$ft.SID74, n=9)
## pal_ft <- colorRampPalette(brewer.pal(6, "YlOrBr"))(length(cI_ft)-1)
## p1 <- spplot(nc, c("ft.SID74"), col.regions=pal_ft, at=cI_ft, col="grey30", main="FT transformed SIDS rate")
## p2 <- spplot(nc, c("pred"), col.regions=pal_ft, at=cI_ft, col="grey30", main="Median-polish fit")
## atn <- pretty(nc$mp_resid[nc$mp_resid < 0])
## atp <- pretty(nc$mp_resid[nc$mp_resid >= 0])
## pal <- c(rev(brewer.pal(length(atn-1), "YlOrRd")), brewer.pal(length(atp[-1]), "YlGnBu")[-1])
## p3 <- spplot(nc, "mp_resid", at=c(atn, atp[-1]), col.regions=pal, col="grey30", main="Median-polish residuals")
## plot(p1, split=c(1,1,1,3), more=TRUE)
## plot(p2, split=c(1,2,1,3), more=TRUE)
## plot(p3, split=c(1,3,1,3), more=FALSE)
###################################################
### code chunk number 40: sids.Rnw:550-553
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 5, pointsize = 12, bg = "white")
cI_ft <- pretty(nc$ft.SID74, n=9)
pal_ft <- colorRampPalette(brewer.pal(6, "YlOrBr"))(length(cI_ft)-1)
p1 <- spplot(nc, c("ft.SID74"), col.regions=pal_ft, at=cI_ft, col="grey30", main="FT transformed SIDS rate")
p2 <- spplot(nc, c("pred"), col.regions=pal_ft, at=cI_ft, col="grey30", main="Median-polish fit")
atn <- pretty(nc$mp_resid[nc$mp_resid < 0])
atp <- pretty(nc$mp_resid[nc$mp_resid >= 0])
pal <- c(rev(brewer.pal(length(atn-1), "YlOrRd")), brewer.pal(length(atp[-1]), "YlGnBu")[-1])
p3 <- spplot(nc, "mp_resid", at=c(atn, atp[-1]), col.regions=pal, col="grey30", main="Median-polish residuals")
plot(p1, split=c(1,1,1,3), more=TRUE)
plot(p2, split=c(1,2,1,3), more=TRUE)
plot(p3, split=c(1,3,1,3), more=FALSE)
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 41: sids.Rnw:579-587
###################################################
sids.nhbr30.dist <- nbdists(ncCC89, cbind(nc$east, nc$north))
sids.nhbr <- listw2sn(nb2listw(ncCC89, glist=sids.nhbr30.dist, style="B", zero.policy=TRUE))
dij <- sids.nhbr[,3]
n <- nc$BIR74
el1 <- min(dij)/dij
el2 <- sqrt(n[sids.nhbr$to]/n[sids.nhbr$from])
sids.nhbr$weights <- el1*el2
sids.nhbr.listw <- sn2listw(sids.nhbr)
###################################################
### code chunk number 42: sids.Rnw:594-595
###################################################
nc$ft.NWBIR74 <- sqrt(1000)*(sqrt(nc$NWBIR74/nc$BIR74) + sqrt((nc$NWBIR74+1)/nc$BIR74))
###################################################
### code chunk number 43: sids.Rnw:602-609
###################################################
lm_nc <- lm(ft.SID74 ~ 1, data=nc)
outl <- which.max(rstandard(lm_nc))
as.character(nc$names[outl])
W <- listw2mat(sids.nhbr.listw)
W.4 <- W[-outl, -outl]
sids.nhbr.listw.4 <- mat2listw(W.4)
nc2 <- nc[!(1:length(nc$CNTY_ID) %in% outl),]
###################################################
### code chunk number 44: sids.Rnw:616-618
###################################################
ecarIaw <- spautolm(ft.SID74 ~ 1, data=nc2, listw=sids.nhbr.listw.4, weights=BIR74, family="CAR")
summary(ecarIaw)
###################################################
### code chunk number 45: sids.Rnw:625-627
###################################################
ecarIIaw <- spautolm(ft.SID74 ~ both - 1, data=nc2, listw=sids.nhbr.listw.4, weights=BIR74, family="CAR")
summary(ecarIIaw)
###################################################
### code chunk number 46: sids.Rnw:634-636
###################################################
ecarIVaw <- spautolm(ft.SID74 ~ ft.NWBIR74, data=nc2, listw=sids.nhbr.listw.4, weights=BIR74, family="CAR")
summary(ecarIVaw)
###################################################
### code chunk number 47: sids.Rnw:641-642
###################################################
nc2$fitIV <- fitted.values(ecarIVaw)
###################################################
### code chunk number 48: sids.Rnw:644-645 (eval = FALSE)
###################################################
## spplot(nc2, "fitIV", cuts=12, col.regions=grey.colors(13, 0.9, 0.3))
###################################################
### code chunk number 49: sids.Rnw:651-654
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
print(spplot(nc2, "fitIV", cuts=12, col.regions=grey.colors(13, 0.9, 0.3)))
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 50: sids.Rnw:662-663
###################################################
ecarIawll <- spautolm(ft.SID74 ~ 1, data=nc2, listw=sids.nhbr.listw.4, weights=BIR74, family="CAR", llprof=seq(-0.1, 0.9020532358, length.out=100))
###################################################
### code chunk number 51: ll_prof (eval = FALSE)
###################################################
## plot(ll ~ lambda, ecarIawll$llprof, type="l")
###################################################
### code chunk number 52: sids.Rnw:672-675
###################################################
.PngNo <- .PngNo + 1; file <- paste("Fig-bitmap-", .PngNo, ".pdf", sep="")
pdf(file=file, width = 6.5, height = 3.5, pointsize = 12, bg = "white")
opar <- par(mar=c(3,3,1,1)+0.1)
plot(ll ~ lambda, ecarIawll$llprof, type="l")
par(opar)
dev.null <- dev.off()
cat("\\includegraphics[width=0.95\\textwidth]{", file, "}\n\n", sep="")
###################################################
### code chunk number 53: sids.Rnw:683-685
###################################################
options("width"=owidth)
options("warn"=ow)
spdep/inst/doc/nb_igraph.html 0000644 0001751 0000144 00000216145 13034515152 015754 0 ustar hornik users
Spatial weights objects as sparse matrices and graphs
Spatial weights objects as sparse matrices and graphs
Introduction
Since the spdep package was created, spatial weights objects have been constructed as lists with three components and a few attributes, in old-style class listw objects. The first component of a listw object is an nb object, a list of n integer vectors, with at least a character vector region.id attribute with n unique values (like the row.names of a data.frame object); n is the number of spatial entities. Component i of this list contains the integer identifiers of the neighbours of i as a sorted vector with no duplication and values in 1:n; if i has no neighbours, the component is a vector of length 1 with value 0L. The nb object may contain an attribute indicating whether it is symmetric or not, that is whether i is a neighbour of j implies that j is a neighbour of i. Some neighbour definitions are symmetric by construction, such as contiguities or distance thresholds, others are asymmetric, such as k-nearest neighbours. The nb object redundantly stores both i-j and j-i links.
The second component of a listw object is a list of n numeric vectors, each of the same length as the corresponding non-zero vectors in the nbobject. These give the values of the spatial weights for each i-j neighbour pair. It is often the case that while the neighbours are symmetric by construction, the weights are not, as for example when weights are row-standardised by dividing each row of input weights by the count of neighbours or cardinality of the neighbour set of i. In the nb2listwfunction, it is also possible to pass through general weights, such as inverse distances, shares of boundary lengths and so on.
The third component of a listw object records the style of the weights as a character code, with "B" for binary weights taking values zero or one (only one is recorded), "W" for row-standardised weights, and so on. In order to subset listw objects, knowledge of the style may be necessary
It is obvious that this is similar to the way in which sparse matrices are stored, either by row - like the listw object, or by column. The key insight is that storing zero values is unnecessary, as we only need to store the row and column locations of non-zero values. Early on, a Netlib library was used to provide limited support in spdep for sparse matrices, followed by functionality in SparseM, spam, and Matrix.
spdep depends on Matrix
Since Matrix is a recommended package, its functionality has increasingly been used over time, and it has become one of two packages on which spdep depends. This is reported on loading:
library(spdep)
## Loading required package: sp
## Loading required package: Matrix
Getting some data
The legacy Columbus OH data set has 49 spatial entities, polygons, defined as the boundaries of policing districts in the city. spdep suggests maptools for portability, but in regular applications, rgdal should be used, because it handles coordinate reference systems more gracefully. We see that the shapefile-based entity IDs are zero-based:
library(maptools)
## Checking rgeos availability: TRUE
columbus <- readShapePoly(system.file("etc/shapes/columbus.shp", package="spdep")[1])
row.names(columbus)[1:10]
## [1] "0" "1" "2" "3" "4" "5" "6" "7" "8" "9"
Finding contiguous neighbours and droppping links
Contiguous neighbours are often used for polygonal spatial entities, here with the poly2nb function defaulting to the queen criterion - entities are neighbours if they share a boundary point. We see that the entity IDs are copied across to the nb object:
nb_q <- poly2nb(columbus)
nb_q
## Neighbour list object:
## Number of regions: 49
## Number of nonzero links: 236
## Percentage nonzero weights: 9.829238
## Average number of links: 4.816327
attr(nb_q, "region.id")[1:10]
## [1] "0" "1" "2" "3" "4" "5" "6" "7" "8" "9"
is.symmetric.nb(nb_q)
## [1] TRUE
In order to make the object more complicated, let us drop the neighbour links for the 21st entity (noting that the print method reports the ID of the entity with no neighbours, not its number in 1:n), and plot the resulting map of neighbours:
col2 <- droplinks(nb_q, 21)
nb_q[[21]]
## [1] 24 30 34
col2[[21]]
## [1] 0
col2
## Neighbour list object:
## Number of regions: 49
## Number of nonzero links: 230
## Percentage nonzero weights: 9.579342
## Average number of links: 4.693878
## 1 region with no links:
## 20
is.symmetric.nb(col2)
## [1] TRUE
coords <- coordinates(columbus)
plot(nb_q, coords, col="grey")
plot(col2, coords, add=TRUE)
Using sparse matrices to represent spatial weights
At present only listw objects can be coerced to objects of classes defined in Matrix. Because the style is lost on coercion, it may not be possible to reconstruct spatial weights as the sparse matrix representation does not preserve it. We will start with symmetric binary weights, first creating a spatial weights object, and signalling that one entity has no neighbours with the zero.policy argument (default false). The matrix and graph representations of no-neighbour entities are not obvious.
nb_B <- nb2listw(col2, style="B", zero.policy=TRUE)
nb_B$style
## [1] "B"
Symmetric sparse matrices
spdep provides coercion methods from listw to the "symmetricMatrix", "RsparseMatrix" and "CsparseMatrix" classes defined in Matrix. The "RsparseMatrix" is the representation that is most similar to listw, as it is row-based, but it is used less frequently in operations on sparse matrices. The entity IDs are passed using sparse matrix row and column names at present. Here we believe that our listw object can be represented as a symmetric matrix, storing only a triangle rather than both i-j and j-i weights. The coercion method does check whether symmetry is present before proceeding:
B <- as(nb_B, "symmetricMatrix")
all(B == t(B))
## [1] TRUE
str(B)
## Formal class 'dsTMatrix' [package "Matrix"] with 7 slots
## ..@ i : int [1:115] 0 0 1 1 2 2 3 3 4 4 ...
## ..@ j : int [1:115] 1 2 2 3 3 4 4 7 5 7 ...
## ..@ Dim : int [1:2] 49 49
## ..@ Dimnames:List of 2
## .. ..$ : chr [1:49] "0" "1" "2" "3" ...
## .. ..$ : chr [1:49] "0" "1" "2" "3" ...
## ..@ x : num [1:115] 1 1 1 1 1 1 1 1 1 1 ...
## ..@ uplo : chr "U"
## ..@ factors : list()
rownames(B)[1:10]
## [1] "0" "1" "2" "3" "4" "5" "6" "7" "8" "9"
Let us now try to retreive the list of neighbours from the symmetric sparse matrix. At present, we have to coerce from one Matrix internal representation to another in order to get to the "dgCMatrix" format used inside mat2listw, so we coerce to "dgTMatrix" from "dsTMatrix". The style is not retreived automatically, but is set to "M" to indicate conversion from a matrix. The neighbour links are retreived correctly, as are the IDs:
nb_B1 <- mat2listw(as(B, "dgTMatrix"))
## Warning in sn2listw(df): 20 is not an origin
nb_B1$style
## [1] "M"
all.equal(nb_B1$neighbours, col2, check.attributes=FALSE)
## [1] TRUE
all.equal(attr(nb_B1$neighbours, "region.id"), attr(nb_B$neighbours, "region.id"))
## [1] TRUE
Log determinants (symmetric weights) used in spatial regression
An initial reason for implementing support for sparse weights matrices in spdep was to permit the calculation of the log determinant term in spatial regressions for larger data sets. Using the eigenvalue approach with for example eigenw is limited by the need to operate on dense matrices in memory to solve the eigenproblem:
rho <- 0.1
sum(log(1 - rho * eigenw(nb_B)))
## [1] -1.44787
When n is large, this may become impractical and/or time-consuming, but does permit the rapid calculation of values of the log determinant for differing values of the spatial coefficient \( \rho \). The Matrix package provides many determinant methods, here for a "dsCMatrix" resulting from subtracting a "dsCMatrix", the product of a scalar and a "dsTMatrix", from a "ddiMatrix". The value of the log determinant follows, calling a sparse Cholesky decomposition internally for suitable input matrices.
n <- nrow(B)
I <- Diagonal(n)
class(I - rho * B)
## [1] "dsCMatrix"
## attr(,"package")
## [1] "Matrix"
c(determinant(I - rho * B, logarithm=TRUE)$modulus)
## [1] -1.44787
The computation of a sparse Cholesky decomposition for each value of the spatial coefficient \( \rho \) may be avoided by updating a pre-computed object; this approach provides fast and accurate log determinants for larger (but not very large) data sets:
nW <- -B
nChol <- Cholesky(nW, Imult=8)
n * log(rho) + (2 * c(determinant(update(nChol, nW, 1/rho))$modulus))
## [1] -1.44787
Asymmetric sparse matrices
The use of row-standardisation leads to asymmetry even if the underlying neighbours are symmetric, unless all entities have matching numbers of neighbours (for example a regular grid on a torus):
nb_W <- nb2listw(col2, style="W", zero.policy=TRUE)
W <- as(nb_W, "CsparseMatrix")
str(W)
## Formal class 'dgCMatrix' [package "Matrix"] with 6 slots
## ..@ i : int [1:230] 1 2 0 2 3 0 1 3 4 1 ...
## ..@ p : int [1:50] 0 2 5 9 13 21 23 27 33 41 ...
## ..@ Dim : int [1:2] 49 49
## ..@ Dimnames:List of 2
## .. ..$ : chr [1:49] "0" "1" "2" "3" ...
## .. ..$ : chr [1:49] "0" "1" "2" "3" ...
## ..@ x : num [1:230] 0.333 0.25 0.5 0.25 0.25 ...
## ..@ factors : list()
all(W == t(W))
## [1] FALSE
The lag method for listw objects is often used to create spatially lagged values, and returns the same values as the vector given by the product of the sparse general matrix and an input numeric vector. Note that by setting zero.policy to TRUE, the spatial lag of entity 21, which has no neighbours, is zero by construction:
set.seed(1)
x <- runif(n)
r1 <- as.numeric(W %*% x)
r2 <- lag(nb_W, x, zero.policy=TRUE)
all.equal(r1, r2, check.attributes=FALSE)
## [1] TRUE
plot(x, r1, ylim=c(0,1))
c(x[21], r1[21])
## [1] 0.9347052 0.0000000
Log determinants (asymmetric weights) used in spatial regression
Calculating the log determinant for asymmetric weights (here with symmetric neighbours and symmetry induced by non-constant numbers of neighbours) may be carried out using eigenvalues as before, but the result may be a complex vector (here it is not, as discussed below). The appropriate determinant method for "dgCMatrix" objects uses an LU decomposition internally:
rho <- 0.5
sum(log(1 - rho * eigenw(nb_W)))
## [1] -1.594376
class(I - rho * W)
## [1] "dgCMatrix"
## attr(,"package")
## [1] "Matrix"
c(determinant(I - rho * W, logarithm=TRUE)$modulus)
## [1] -1.594376
We can show the internal workings of the method as:
LU <- lu(I - rho * W)
sum(log(abs(diag(slot(LU, "U")))))
## [1] -1.594376
Log determinants: symmetric by similarity
The nb2listw function stores components that can be employed to transform the asymmetric weights matrix to symmetry by similarity, permitting the same log determinant to be computed using less costly numerical methods. The "W" style used the cardinalities of neighbour sets (row sums) to introduce row standardisation, and they are stored as an attribute:
d <- attr(nb_W$weights, "comp")$d
all.equal(d, card(col2))
## [1] TRUE
If we first restore the row-standarised matrix to its binary form (which must be symmetric), we can pre- and post-multiply by the square roots of the inverted neighbour counts, yielding a symmetric matrix with the appropriate properties:
dW <- Diagonal(n, d) %*% W
all(dW == t(dW))
## [1] TRUE
isd <- Diagonal(n, 1/sqrt(d))
isd[21,21]
## [1] Inf
Ws <- as(isd %*% dW %*% isd, "symmetricMatrix")
rowSums(Ws)[21]
## 20
## 0
class(Ws)
## [1] "dsCMatrix"
## attr(,"package")
## [1] "Matrix"
c(determinant(I - rho * Ws, logarithm=TRUE)$modulus)
## [1] -1.594376
As can be seen, the division by the square root of zero for entity 21 is not a problem as the row of dW is zero. The transformation by similarity permits the use of numerical methods for sparse symmetric matrices (and equivalently for eigenvalues and dense matrices). Note that this transformation is not available for intrinsically asymmetric neighbours, or for intrinsically asymmetric general weights.
Using arpack in igraph for finding some eigenvalues
In spatial regression, the domain of the spatial coefficient is given by the inverse of the maximum and minimum eigenvalues. When n is moderate, we have the eigenvalues anyway, so the interval for line search is available without extra effort. When n is somewhat larger, use may be made of the arpack function in igraph. The function is not stable and requires manual tuning, so its use is commented out here:
1/range(eigenw(nb_B))
## [1] -0.3212551 0.1638329
library(igraph)
##
## Attaching package: 'igraph'
## The following objects are masked from 'package:stats':
##
## decompose, spectrum
## The following object is masked from 'package:base':
##
## union
f2 <- function(x, extra=NULL) {as.vector(B %*% x)}
1/arpack(f2, sym=TRUE, options=list(n=n, nev=1, ncv=8, which="LA", maxiter=200))$values
## Note: method with signature 'Matrix#numLike' chosen for function '%*%',
## target signature 'dsTMatrix#numeric'.
## "TsparseMatrix#ANY" would also be valid
## Note: method with signature 'sparseMatrix#matrix' chosen for function '%*%',
## target signature 'dsTMatrix#matrix'.
## "TsparseMatrix#ANY" would also be valid
## [1] 0.1638329
1/arpack(f2, sym=TRUE, options=list(n=n, nev=1, ncv=8, which="SA", maxiter=200))$values
## [1] -0.3212551
#1/arpack(f2, sym=TRUE, options=list(n=n, nev=2, ncv=8, which="BE", maxiter=200))$values
# "BE" gives: At line 558 of file dsaup2.f: Fortran runtime error:
# Index '9' of dimension 1 of array 'bounds' above upper bound of 8
In this case, the results are trivial with small n and a symmetric sparse matrix. It can be challenging to find the maxiter= cutoff for larger n; the which="BE" argument takes both ends here.
1/range(eigenw(nb_W))
## [1] -1.544645 1.000000
f2 <- function(x, extra=NULL) {as.vector(W %*% x)}
1/arpack(f2, sym=FALSE, options=list(n=n, nev=1, ncv=8, which="LR", maxiter=200))$values
## [1] 1+0i
1/arpack(f2, sym=FALSE, options=list(n=n, nev=1, ncv=8, which="SR", maxiter=200))$values
## [1] -1.544645+0i
For asymmetric matrices, we need to go to each end separately, so finding the domain bounds can be hard. Using row-standardisation has the nice feature of setting the upper bound to unity, and there are graph methods for finding out whether the lower bound is -1.
Using igraph for spatial weights as graphs
Converting from symmetric adjacency matrix to graph
First we'll see how to get from sparse matrices to graphs. The mode of a symmetric matrix is "undirected" by definition:
class(B)
## [1] "dsTMatrix"
## attr(,"package")
## [1] "Matrix"
object.size(B)
## 9040 bytes
library(igraph)
g1 <- graph.adjacency(B, mode="undirected")
class(g1)
## [1] "igraph"
object.size(g1)
## 8664 bytes
Converting from graph to symmetric adjacency matrix
We can also convert this graph pack to the same matrix, but note that get.adjacency chooses a particular class of sparse matrix to be returned, so that the conversion process typically leads many matrices to fewer graph types, and back to fewer matrix types:
B1 <- get.adjacency(g1)
class(B1)
## [1] "dgCMatrix"
## attr(,"package")
## [1] "Matrix"
object.size(B1)
## 9944 bytes
all.equal(B, as(as(B1, "dgTMatrix"), "symmetricMatrix"))
## [1] TRUE
Graph components in spdep
A simple example of using igraph to do the same as an existing spdep function is Nicholas Lewin-Koh's n.comp.nb from the early days of the package. It is useful to know whether an nb object is divided up into separate subgraphs, and which entities are members of which such subgraph.
res <- n.comp.nb(col2)
table(res$comp.id)
##
## 1 2 3
## 42 1 6
Graph components in igraph
The same result can be obtained using the clusters function in igraph:
c1 <- clusters(g1)
c1$no == res$nc
## [1] TRUE
all.equal(c1$membership, res$comp.id)
## [1] "names for target but not for current"
all.equal(c1$csize, c(table(res$comp.id)), check.attributes=FALSE)
## [1] TRUE
The same holds for the row-standardised variant:
W <- as(nb2listw(col2, style="W", zero.policy=TRUE), "CsparseMatrix")
g1W <- graph.adjacency(W, mode="directed", weighted="W")
c1W <- clusters(g1W)
all.equal(c1W$membership, res$comp.id)
## [1] "names for target but not for current"
Shortest paths in weights matrices: igraph
Finding shortest paths between spatial entities across a given graph is a way to express closeness. If the graph is connected, that is that it is possible to traverse the graph edges from any node to any other, the longest shortest path is then a useful measure. In igraph, the is.connected function tells us tells us that our graph is not connected, as we know from the figure above. The diameter measure is then the diameter of the largest component subgraph. Note that this generates an n x n matrix:
is.connected(g1)
## [1] FALSE
dg1 <- diameter(g1)
dg1
## [1] 7
sp_mat <- shortest.paths(g1)
str(sp_mat)
## num [1:49, 1:49] 0 1 1 2 2 3 4 3 3 4 ...
## - attr(*, "dimnames")=List of 2
## ..$ : chr [1:49] "0" "1" "2" "3" ...
## ..$ : chr [1:49] "0" "1" "2" "3" ...
Shortest paths in weights matrices: spdep
If we do the same in spdep, using nblag to a maximum number of lag orders - the diameter, but which is unknown in advance (the largest lag order for which the number of links is greater than zero), we run into the problem of how to represent missing neighbour information.
nbl10 <- nblag(col2, maxlag=10)
vals <- sapply(nbl10, function(x) sum(card(x)))
zero <- which(vals == 0)
zero[1]-1
## [1] 7
If we insert zero into the weights matrix where there is no connection using zero.policy=TRUE, we generate a zero shortest path. If we are to create a matrix that matches the one produced by shortest.paths, we need to set all these non-structural zeros to infinity (the length of the path between unconnected nodes), and re-instate structural zeros on the diagonal:
lmat <- lapply(nbl10[1:(zero[1]-1)], nb2mat, style="B", zero.policy=TRUE)
mat <- matrix(0, n, n)
for (i in seq(along=lmat)) mat = mat + i*lmat[[i]]
mat[mat==0] <- Inf
diag(mat) <- 0
all.equal(mat, sp_mat, check.attributes=FALSE)
## [1] TRUE
Smirnov/Anselin (2009) cyclical matrices
Another area in which a graph representation might prove useful is in trying to establish the domain of the spatial coefficient when spatial weights are row-standardised. In that case by construction we know that the maximum eigenvalue is 1. If there are multiple blocks, that is graph components, where the numbers of nodes per block are greater than 1, then each will have a maximum eigenvalue of 1. The remaining problems are the numbers of zero eigenvalues (at least the singleton graph components), and whether any non-singleton component fulfills the condition termed by Smirnov and Anselin (2009) a cyclical matrix, for which the minimum eigenvalue is -1. The term cyclical appears to be used in many different ways, and it is not clear that its use here after Smirnov and Anselin (2009, pp. 2984-2985) indicates which meaning should be used to find the relevant graph function. The definition used here is that a block matrix (subgraph) is cyclical if: “for every location, every pair of its neighbours are not connected.” That is, if w[i,j] and w[i,k] are greater than zero, w[j,k] must be zero to meet the condition.
The internal function find_q1_q2 returns the number of non-singleton components, and the number of these that meet this condition. It does this for each block/subgraph by testing the condition until it meets w[j,k] > 0, at which point it breaks. Smirnov and Anselin (2009) state that rook neighbours on a regular grid meet the condition:
nb_r <- cell2nb(7, 7, type="rook")
nb_rW <- nb2listw(nb_r, style="W")
spdep:::find_q1_q2(nb_rW)
## [1] 1 1
One block/graph component is found, and this one meets the cyclical matrix condition, as also shown by the domain:
1/range(Re(eigenw(similar.listw(nb_rW))))
## [1] -1 1
This does not apply to the spatial weights we have been using above, with two non-singleton components, neither meeting the cyclical matrix condition:
spdep:::find_q1_q2(nb_W)
## [1] 2 0
1/range(Re(eigenw(similar.listw(nb_W))))
## [1] -1.544645 1.000000
By construction, all two-node connected graph components also meet the condition, as the eigenvalues sum to zero, and the maximum is unity, so the minimum must be -1.
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