--- nlme-3.1.131.orig/debian/changelog +++ nlme-3.1.131/debian/changelog @@ -0,0 +1,556 @@ +nlme (3.1.131-2) unstable; urgency=medium + + * Re-uploading with corrected changelog entry + + -- Dirk Eddelbuettel Wed, 08 Feb 2017 20:41:05 -0600 + +nlme (3.1.131-1) unstable; urgency=medium + + * New upstream release + + -- Dirk Eddelbuettel Wed, 08 Feb 2017 20:05:46 -0600 + +nlme (3.1.130-1) unstable; urgency=medium + + * New upstream release + + -- Dirk Eddelbuettel Tue, 31 Jan 2017 21:44:57 -0600 + +nlme (3.1.129-1) unstable; urgency=medium + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Thu, 19 Jan 2017 21:00:52 -0600 + +nlme (3.1.128-2) unstable; urgency=medium + + * debian/compat: Created + + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Tue, 21 Jun 2016 19:38:50 -0500 + +nlme (3.1.128-1) unstable; urgency=medium + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Tue, 10 May 2016 07:08:56 -0500 + +nlme (3.1.127-1) unstable; urgency=medium + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Sat, 16 Apr 2016 12:16:35 -0500 + +nlme (3.1.126-1) unstable; urgency=medium + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Mon, 14 Mar 2016 13:36:36 -0500 + +nlme (3.1.125-1) unstable; urgency=medium + + * New upstream release + + -- Dirk Eddelbuettel Sat, 27 Feb 2016 10:47:29 -0600 + +nlme (3.1.124-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Fri, 22 Jan 2016 14:03:37 -0600 + +nlme (3.1.123-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Sun, 17 Jan 2016 10:49:49 -0600 + +nlme (3.1.122-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Wed, 19 Aug 2015 16:45:27 -0500 + +nlme (3.1.121-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Tue, 30 Jun 2015 09:03:21 -0500 + +nlme (3.1.120-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Fri, 20 Feb 2015 06:38:01 -0600 + +nlme (3.1.119-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Sat, 10 Jan 2015 08:34:49 -0600 + +nlme (3.1.118-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Tue, 07 Oct 2014 14:28:23 -0500 + +nlme (3.1.117-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Mon, 31 Mar 2014 06:57:23 -0500 + +nlme (3.1.116-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Fri, 28 Mar 2014 06:36:01 -0500 + +nlme (3.1.115-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Sun, 09 Mar 2014 12:20:21 -0500 + +nlme (3.1.113-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Sun, 17 Nov 2013 19:21:30 -0600 + +nlme (3.1.111-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Thu, 15 Aug 2013 08:42:49 -0500 + +nlme (3.1.110-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Sat, 13 Jul 2013 12:11:58 -0500 + +nlme (3.1.109-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + * (Re-)building with R 3.0.0 (beta) + + -- Dirk Eddelbuettel Mon, 25 Mar 2013 21:28:50 -0500 + +nlme (3.1.108-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Sun, 27 Jan 2013 07:49:23 -0600 + +nlme (3.1.107-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Mon, 14 Jan 2013 15:39:42 -0600 + +nlme (3.1.106-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + + -- Dirk Eddelbuettel Thu, 06 Dec 2012 14:06:22 -0600 + +nlme (3.1.105-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Mon, 08 Oct 2012 06:47:55 -0500 + +nlme (3.1.104-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set Build-Depends: to current R version + * debian/control: Change Depends to ${R:Depends} + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Wed, 23 May 2012 07:12:09 -0500 + +nlme (3.1.103-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Mon, 16 Jan 2012 09:54:06 -0600 + +nlme (3.1.102-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + + -- Dirk Eddelbuettel Sat, 23 Jul 2011 13:06:57 -0500 + +nlme (3.1.101-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Fri, 06 May 2011 20:01:41 -0500 + +nlme (3.1.100-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + + -- Dirk Eddelbuettel Wed, 13 Apr 2011 18:04:08 -0500 + +nlme (3.1.98-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + + -- Dirk Eddelbuettel Thu, 10 Feb 2011 11:57:19 -0600 + +nlme (3.1.97-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Sat, 02 Oct 2010 14:30:51 -0500 + +nlme (3.1.96-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + + -- Dirk Eddelbuettel Thu, 15 Oct 2009 21:36:41 -0500 + +nlme (3.1.95-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Mon, 05 Oct 2009 15:00:07 -0500 + +nlme (3.1.94-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Fri, 04 Sep 2009 14:18:02 -0500 + +nlme (3.1.93-1) unstable; urgency=low + + * New upstream release + + * This upstream version includes the translation files submitted as + earlier Debian bug reports. (Closes: #528215, #528753) + + * debian/control: Set (Build-)Depends: to current R version + * debian/control: Set Standards-Version: to current version + + -- Dirk Eddelbuettel Sun, 16 Aug 2009 23:39:10 -0500 + +nlme (3.1.92-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Sun, 24 May 2009 09:15:20 -0500 + +nlme (3.1.91-1) unstable; urgency=low + + * New upstream release + + * Includes contributed German translation (Closes: #526268) + + * debian/control: Changed Section: to new section 'gnu-r' + + * debian/control: Set (Build-)Depends: to current R version + * debian/control: Set Standards-Version: to current version 3.8.1 + + -- Dirk Eddelbuettel Mon, 04 May 2009 19:39:43 -0500 + +nlme (3.1.90-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + * debian/control: Set Standards-Version: to current version 3.8.0 + + -- Dirk Eddelbuettel Tue, 30 Dec 2008 16:40:11 -0600 + +nlme (3.1.89-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Mon, 09 Jun 2008 20:26:33 -0500 + +nlme (3.1.88-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Sun, 30 Mar 2008 21:12:49 -0500 + +nlme (3.1.87-1) unstable; urgency=low + + * New upstream release + + * debian/control: Set (Build-)Depends: to current R version + * debian/control: Set Standards-Version: to current version 3.7.3 + + -- Dirk Eddelbuettel Tue, 19 Feb 2008 16:56:27 -0600 + +nlme (3.1.86-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Fri, 05 Oct 2007 06:49:14 -0500 + +nlme (3.1.85-1) unstable; urgency=low + + * New upstream release + * Built with R 2.6.0 release candidate, setting (Build-)Depends: to + 'r-base-(core|dev) >> 2.5.1' to prevent move to testing before R 2.6.0 + + -- Dirk Eddelbuettel Sat, 22 Sep 2007 11:20:48 -0500 + +nlme (3.1.84-1) unstable; urgency=low + + * New upstream release + * debian/control: Upgraded (Build-)Depends: to 'r-base-dev (>= 2.5.1)' + * debian/control: Removed Doug as Uploaders + + -- Dirk Eddelbuettel Sat, 28 Jul 2007 18:45:43 -0500 + +nlme (3.1.83-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Thu, 14 Jun 2007 21:07:05 -0500 + +nlme (3.1.82-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Thu, 14 Jun 2007 20:55:58 -0500 + +nlme (3.1.81-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Wed, 16 May 2007 20:07:29 -0500 + +nlme (3.1.80-1) unstable; urgency=low + + * New upstream release + + * debian/control: Updated (Build-)Depensd to r-base-core (>= 2.5.0) + + -- Dirk Eddelbuettel Tue, 24 Apr 2007 22:10:40 -0500 + +nlme (3.1.79-1) unstable; urgency=low + + * New upstream release + * debian/control: Updated (Build-)Depensd to r-base-core (>= 2.4.1) + + -- Dirk Eddelbuettel Mon, 1 Jan 2007 14:16:01 -0600 + +nlme (3.1.78-1) unstable; urgency=low + + * New upstream release + * debian/control: Updated (Build-)Depensd to r-base-core (>= 2.4.0) + + -- Dirk Eddelbuettel Sun, 10 Dec 2006 20:46:07 -0600 + +nlme (3.1.77-1) unstable; urgency=low + + * New upstream release, built with R 2.4.0 rc + * debian/control: Updated (Build-)Depensd to r-base-core (>> 2.3.1) + + -- Dirk Eddelbuettel Fri, 29 Sep 2006 15:08:37 -0500 + +nlme (3.1.76-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Mon, 18 Sep 2006 20:27:56 -0500 + +nlme (3.1.75-1) unstable; urgency=low + + * New upstream releases + + -- Dirk Eddelbuettel Wed, 19 Jul 2006 21:44:45 -0500 + +nlme (3.1.74-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Tue, 6 Jun 2006 17:24:44 -0500 + +nlme (3.1.73-1) unstable; urgency=low + + * New upstream release + + * debian/control: Standards-Version: increased to 3.7.2 + + -- Dirk Eddelbuettel Mon, 22 May 2006 21:43:16 -0500 + +nlme (3.1.72-1) unstable; urgency=low + + * New upstream release + + * debian/rules: Simplified to cdbs-based one-liner sourcing r-cran.mk + (but overriding the default library location as this package is part + of the r-recommended bundle which install into /usr/lib/R/library) + * debian/control: Hence Build-Depends: updated to r-base-dev (>= 2.3.0) + + * debian/control: Standards-Version: increased to 3.7.0, no changes needed + + -- Dirk Eddelbuettel Sun, 14 May 2006 21:13:54 -0500 + +nlme (3.1.71-1) unstable; urgency=low + + * New upstream release corresponding to R 2.3.0 + + * debian/control: Updated Build{,-Depends}: to r-base-core (>> 2.2.1) + * debian/watch: Updated to version=3 + + * New (old) maintainer, with Doug as Uploader: and co-maintainer + + -- Dirk Eddelbuettel Tue, 18 Apr 2006 21:49:40 -0500 + +nlme (3.1.68-2) unstable; urgency=low + + * debian/rules Remove build-time tests that were failing on a trivial + numerical inconsistency between architectures (Closes: #350247) + + -- Douglas Bates Wed, 1 Feb 2006 10:31:56 -0600 + +nlme (3.1.68-1) unstable; urgency=low + + * New upstream release + * debian/post{inst,rm}: No longer need to call /usr/bin/R for html index + * debian/rules: Updated with respect to build arch. + * debian/rules: Do not run 'R CMD check' on all architectures + * debian/post{inst,rm}: Call /usr/bin/R with explicit path (thanks, Kurt Hornik) + * debian/control: Upgraded Standards-Version: to 3.6.2.1 + * debian/watch: Corrected regular expression with (thanks, Rafael Laboissier) + + -- Douglas Bates Thu, 26 Jan 2006 14:58:00 -0600 + +nlme (3.1.62-1) unstable; urgency=low + + * New upstream release. + + * New maintainer (with agreement of previous maintainer) + + -- Douglas Bates Mon, 25 Jul 2005 16:56:36 -0500 + +nlme (3.1.55-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Wed, 2 Mar 2005 20:38:29 -0600 + +nlme (3.1.53-1) unstable; urgency=low + + * New upstream release + + -- Dirk Eddelbuettel Wed, 3 Nov 2004 20:05:26 -0600 + +nlme (3.1.52-2) unstable; urgency=low + + * debian/control: Versioned Build-Depends: on r-cran-lattice (>= 0.10.11) + (Closes: #276017) + + -- Dirk Eddelbuettel Mon, 11 Oct 2004 21:19:36 -0500 + +nlme (3.1.52-1) unstable; urgency=low + + * New upstream release + + * Built under R 2.0.0 + * debian/control: Updated Build-Depends: and Depends: accordingly + * debian/rules: Rewritten to allow running of 'R CMD check' + + * debian/watch: Added watch file + * debian/post{inst,rm}: Added to rebuild html help index + + -- Dirk Eddelbuettel Thu, 7 Oct 2004 21:39:49 -0500 + +nlme (3.1.50-1) unstable; urgency=low + + * New upstream release + * debian/post{inst,rm}: Call build-help.pl to update package.html list + + -- Dirk Eddelbuettel Tue, 17 Aug 2004 21:34:28 -0500 + +nlme (3.1.48-2) unstable; urgency=low + + * Built with 1.9.0 cvs dated 2004.03.21 (Closes: #240777) + * debian/control: Added r-cran-lattice to Build-Depends + * debian/control: Depends on r-base-core (>> 1.8.1) + + -- Dirk Eddelbuettel Mon, 29 Mar 2004 08:34:03 -0600 + +nlme (3.1.48-1) unstable; urgency=low + + * New upstream release for the upcoming R 1.9.0 release + * Built with 1.9.0 cvs dated 2004.02.29 (in package r-base_1.8.1.cvs.20040229) + + -- Dirk Eddelbuettel Thu, 4 Mar 2004 19:45:47 -0600 + +nlme (3.1.45-2) unstable; urgency=low + + * debian/control: Replaces r-recommended (<< 1.9.0), not just <= 1.8.1-1 + + -- Dirk Eddelbuettel Sun, 1 Feb 2004 17:31:26 -0600 + +nlme (3.1.45-1) unstable; urgency=low + + * Initial Debian Release as a standalone package rather than as part of + the r-recommended package built from the maine r-base source package. + + -- Dirk Eddelbuettel Tue, 27 Jan 2004 20:58:29 -0600 + + --- nlme-3.1.131.orig/debian/compat +++ nlme-3.1.131/debian/compat @@ -0,0 +1 @@ +7 --- nlme-3.1.131.orig/debian/control +++ nlme-3.1.131/debian/control @@ -0,0 +1,18 @@ +Source: nlme +Section: gnu-r +Priority: optional +Maintainer: Dirk Eddelbuettel +Build-Depends: debhelper (>= 7.0.0), r-base-dev (>= 3.3.2), cdbs, r-cran-lattice (>= 0.12-11.1) +Standards-Version: 3.9.8 + +Package: r-cran-nlme +Architecture: any +Depends: ${shlibs:Depends}, ${R:Depends}, r-cran-lattice (>= 0.12-11.1) +Replaces: r-recommended (<< 1.9.0) +Description: GNU R package for (non-)linear mixed effects models + This package provides functions to fit and compare linear and non-linear + mixed-effects models. + . + This package is part of the set of packages that are 'recommended' + by R Core and shipped with upstream source releases of R itself. + --- nlme-3.1.131.orig/debian/copyright +++ nlme-3.1.131/debian/copyright @@ -0,0 +1,39 @@ +This is the Debian GNU/Linux r-cran-nlme package of nlme, a collection +of functions to fit and compare linear and non-linear mixed-effects +models. Nlme was written by Jose Pinheiro, Douglas Bates, Saikat +DebRoy and Deepayan Sarkar. + +This package was created by Dirk Eddelbuettel . +The sources were downloaded from + http://cran.us.r-project.org/src/contrib/ +and are also included in the (large) source tar archive of R itself at + http://cran.us.r-project.org/src/base/ + +The package was renamed from its upstream name 'nlme' to 'r-cran-nlme' +to fit the pattern of CRAN (and non-CRAN) packages for R. + +Copyright (C) 1998-2008 Jose Pinheiro, Douglas Bates, Saikat DebRoy, Deepayan Sarkar and the R Core team + +License: GPL + +On a Debian GNU/Linux system, the GPL license is included in the file +/usr/share/common-licenses/GPL. + +For reference, the upstream DESCRIPTION [with lines broken to 80 cols] +file is included below: + + Package: nlme + Version: 3.1-45 + Date: 2003/08/29 + Priority: recommended + Title: Linear and nonlinear mixed effects models + Author: Jose Pinheiro , + Douglas Bates , + Saikat DebRoy , and + Deepayan Sarkar + Maintainer: Douglas Bates + Description: Fit and compare Gaussian linear and nonlinear mixed-effects + models. + Depends: nls, lattice, R(>= 1.7.0) + License: GPL version 2 or later + --- nlme-3.1.131.orig/debian/overrides +++ nlme-3.1.131/debian/overrides @@ -0,0 +1,2 @@ +r-cran-nlme: extra-license-file usr/lib/R/library/nlme/LICENCE + --- nlme-3.1.131.orig/debian/rules +++ nlme-3.1.131/debian/rules @@ -0,0 +1,7 @@ +#!/usr/bin/make -f +# -*- makefile -*- +# debian/rules file for the Debian/GNU Linux r-cran-nlme package +# Copyright 2004-2007 by Dirk Eddelbuettel + +include /usr/share/R/debian/r-cran.mk + --- nlme-3.1.131.orig/debian/watch +++ nlme-3.1.131/debian/watch @@ -0,0 +1,3 @@ +version=3 +opts="uversionmangle=s/-/\./" \ + http://cran.r-project.org/src/contrib/nlme_([-0-9\.]*).tar.gz