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\ [ -L "$(gridservices_DATA)" ] || ln -s available/$(gridservices_DATA) . distuninstallcheck: @: # Tell versions [3.59,3.63) of GNU make to not export all variables. # Otherwise a system limit (for SysV at least) may be exceeded. .NOEXPORT: globus_gram_job_manager_condor-2.6/PaxHeaders.22347/globus-gram-job-manager-condor-uninstalled.pc.in0000644000000000000000000000013212756054561030455 xustar0030 mtime=1471699313.005133919 30 atime=1471705058.908133919 30 ctime=1471705059.272133919 globus_gram_job_manager_condor-2.6/globus-gram-job-manager-condor-uninstalled.pc.in0000664000175000017500000000030412756054561031500 0ustar00fedorafedora00000000000000prefix=@prefix@ exec_prefix=@exec_prefix@ libdir=@libdir@ includedir=@includedir@ Name: globus-gram-job-manager-condor Description: Globus Toolkit - Condor Job Manager Support Version: @VERSION@ globus_gram_job_manager_condor-2.6/PaxHeaders.22347/jobmanager-condor.in0000644000000000000000000000013212756054561023242 xustar0030 mtime=1471699313.005133919 30 atime=1471699313.005133919 30 ctime=1471705059.304133919 globus_gram_job_manager_condor-2.6/jobmanager-condor.in0000664000175000017500000000021412756054561024265 0ustar00fedorafedora00000000000000stderr_log,local_cred - @sbindir@/globus-job-manager globus-job-manager -conf @sysconfdir@/globus/globus-gram-job-manager.conf -type condor globus_gram_job_manager_condor-2.6/PaxHeaders.22347/condor.pm0000644000000000000000000000013212756054561021145 xustar0030 mtime=1471699313.005133919 30 atime=1471699313.004133919 30 ctime=1471705059.300133919 globus_gram_job_manager_condor-2.6/condor.pm0000775000175000017500000007172512756054561022212 0ustar00fedorafedora00000000000000# Copyright 1999-2006 University of Chicago # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # Globus::GRAM::JobManager::condor package # # CVS Information: # $Source$ # $Date$ # $Revision$ # $Author$ use Globus::GRAM::Error; use Globus::GRAM::JobState; use Globus::GRAM::JobManager; use Globus::GRAM::StdioMerger; use Globus::Core::Paths; use Globus::Core::Config; use IPC::Open3; # Load OSG group accounting module, if possible eval { require Globus::GRAM::JobManager::condor_accounting_groups }; our $accounting_groups_callout = ! $@; # Don't make callout if we couldn't load module package Globus::GRAM::JobManager::condor; @ISA = qw(Globus::GRAM::JobManager); my ($condor_submit, $condor_rm, $condor_config, $isNFSLite); BEGIN { my $config = new Globus::Core::Config( '${sysconfdir}/globus/globus-condor.conf'); $condor_submit = $config->get_attribute("condor_submit") || "no"; $condor_rm = $config->get_attribute("condor_rm") || "no"; $condor_arch = $config->get_attribute("condor_arch") || undef; $condor_os = $config->get_attribute("condor_os") || undef; $condor_config = $config->get_attribute("condor_config") || ""; $condor_check_vanilla_files = $config->get_attribute( "check_vanilla_files") || "no"; $condor_mpi_script = $config->get_attribute("condor_mpi_script") || "no"; if ($condor_config ne '') { $ENV{CONDOR_CONFIG} = $condor_config; } $isNFSLite = 0; } sub new { my $proto = shift; my $class = ref($proto) || $proto; my $self = $class->SUPER::new(@_); my $log_dir; my $description = $self->{JobDescription}; my $stdout = $description->stdout(); my $stderr = $description->stderr(); my $globus_condor_conf = "$Globus::Core::Paths::sysconfdir/globus-condor.conf"; if (-r $globus_condor_conf) { local(*FH); if (open(FH, "<$globus_condor_conf")) { while() { chomp; if (m/^isNFSLite=([0-9]*)$/) { $isNFSLite = int($1); last; } } close(FH); } } if (! exists($self->{condor_logfile})) { if(! exists($ENV{GLOBUS_SPOOL_DIR})) { $log_dir = $self->job_dir(); } else { $log_dir = $ENV{GLOBUS_SPOOL_DIR}; } $self->{condor_logfile} = "$log_dir/condor." . $description->uniq_id(); } if(! -e $self->{condor_logfile}) { if ( open(CONDOR_LOG_FILE, '>>' . $self->{condor_logfile}) ) { close(CONDOR_LOG_FILE); } } if($description->jobtype() eq 'multiple' && $description->count > 1) { $self->{STDIO_MERGER} = new Globus::GRAM::StdioMerger($self->job_dir(), $stdout, $stderr); } else { $self->{STDIO_MERGER} = 0; } bless $self, $class; return $self; } sub submit { my $self = shift; my $description = $self->{JobDescription}; my @environment; my $environment_string; my $script_filename; my @requirements; my @tmpr; my $rank = ''; my @arguments; my $argument_string; my @response_text; my @submit_attrs; my $submit_attrs_string; my $multi_output = 0; my $pid; my $status; my ($condor_submit_out, $condor_submit_err); my $rc; my $scratch_isset = 0; # Flag if the SCRATCH_DIRECTORY environment variable is set indicating likely GRAM job # Reject jobs that want streaming, if so configured if ( $description->streamingrequested() && $description->streamingdisabled() ) { $self->log("Streaming is not allowed."); return Globus::GRAM::Error::OPENING_STDOUT; } if($description->jobtype() eq 'single' || $description->jobtype() eq 'multiple') { $universe = 'vanilla'; if ($description->jobtype() eq 'multiple' && ($description->count() > 1)) { $multi_output = 1; } } elsif($description->jobtype() eq 'condor') { $universe = 'standard' } elsif($description->jobtype() eq 'mpi' && $condor_mpi_script ne 'no') { $universe = 'parallel'; } else { return Globus::GRAM::Error::JOBTYPE_NOT_SUPPORTED(); } # Validate some RSL parameters if(!defined($description->directory())) { return Globus::GRAM::Error::RSL_DIRECTORY; } elsif( $description->stdin() eq '') { return Globus::GRAM::Error::RSL_STDIN; } elsif(ref($description->count()) || $description->count() != int($description->count())) { return Globus::GRAM::Error::INVALID_COUNT(); } elsif( $description->executable eq '') { return Globus::GRAM::Error::RSL_EXECUTABLE(); } # In the standard universe, we can validate stdin and directory # because they will sent to the execution host by condor transparently. if($universe eq 'standard' || $condor_check_vanilla_files eq 'yes') { if(! -d $description->directory()) { return Globus::GRAM::Error::BAD_DIRECTORY(); } elsif(! -r $description->stdin()) { return Globus::GRAM::Error::STDIN_NOT_FOUND(); } elsif(! -f $description->executable()) { return Globus::GRAM::Error::EXECUTABLE_NOT_FOUND(); } elsif(! -x $description->executable()) { return Globus::GRAM::Error::EXECUTABLE_PERMISSIONS(); } } @environment = $description->environment(); foreach my $tuple ($description->environment()) { if(!ref($tuple) || scalar(@$tuple) != 2) { return Globus::GRAM::Error::RSL_ENVIRONMENT(); } } # NFS lite start if ($isNFSLite && !$isManagedFork) { my $osg_grid = ''; my $use_osg_grid = 1; map { if ($_->[0] eq "OSG_GRID") { $osg_grid = $_->[1]; } elsif ($_->[0] eq "OSG_DONT_USE_OSG_GRID_FOR_GL") { $use_osg_grid = 0; } elsif ($_->[0] eq "LOGNAME") { $logname = $_->[1]; } elsif ($_->[0] eq "SCRATCH_DIRECTORY") { $scratch_isset = 1; $scratch_directory = $_->[1]; $_->[1] = '$_CONDOR_SCRATCH_DIR'; } elsif ($_->[0] eq "X509_USER_PROXY") { $_->[0] = "CHANGED_X509"; } } @environment; if ($scratch_isset) { # Remote_InitialDir apparently suppresses the setting of the SCRATCH_DIRECTORY env variable push(@environment,["MY_INITIAL_DIR",'$_CONDOR_SCRATCH_DIR']); } elsif ( $description->directory() =~ m/.+$logname/xms ) { # If the directory ends with the logname it might be a globus-job-run job # so take control of the initial_dir push(@environment,["MY_INITIAL_DIR",'$_CONDOR_SCRATCH_DIR'] ); } else { # assume that remote_initialdir is set and the submitter knows what they are # doing. push(@environment,["MY_INITIAL_DIR",$description->directory()] ); } } # NFS Lite End $environment_string = join(';', map {$_->[0] . "=" . $_->[1]} @environment); @arguments = $description->arguments(); foreach (@arguments) { if(ref($_)) { return Globus::GRAM::Error::RSL_ARGUMENTS(); } } if ($description->directory() =~ m|^[^/]|) { my $home = (getpwuid($<))[7]; $description->add('directory', "$home/".$description->directory()); } if ($description->executable() =~ m|^[^/]|) { $description->add('executable', $description->directory() . '/' . $description->executable()); } if ($universe eq 'parallel') { unshift(@arguments, $description->executable); $description->add('executable', $condor_mpi_script); } if($#arguments >= 0) { $argument_string = '"' . join(' ', map { $_ =~ s/'/''/g; $_ =~ s/"/""/g; $_ = "'$_'"; } @arguments) . '"'; } else { $argument_string = ''; } @submit_attrs = $description->condorsubmit(); if(defined($submit_attrs[0])) { foreach $tuple (@submit_attrs) { if(!ref($tuple) || scalar(@$tuple) != 2) { return Globus::GRAM::Error::RSL_SCHEDULER_SPECIFIC(); } } $submit_attrs_string = join("\n", map {$_->[0] . "=" . $_->[1]} @submit_attrs); } else { $submit_attrs_string = ''; } my $group; if ($accounting_groups_callout) { $group = Globus::GRAM::JobManager::condor_accounting_groups::obtain_condor_group(\@environment, $self); } # Create script for condor submission $script_filename = $self->job_dir() . '/scheduler_condor_submit_script'; local(*SCRIPT_FILE); $rc = open(SCRIPT_FILE, ">$script_filename") ; if (!$rc) { return $self->respond_with_failure_extension( "open: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "#\n# description file for condor submission\n#\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "Universe = $universe\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "Notification = Never\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "Executable = " . $description->executable . "\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } @tmpr = $description->condor_os; if (scalar(@tmpr) > 0) { my $r = "(" . join(" || ", map {"OpSys == \"$_\""} @tmpr) . ")"; push(@requirements, $r); } elsif (defined($condor_os)) { my $r = "(" . join(" || ", map { "OpSys == \"$_\"" } split(/\s+/, $condor_os)) . ")"; push(@requirements, $r); } @tmpr = $description->condor_arch(); if (scalar(@tmpr) > 0) { my $r = "(" . join(" || ", map {"Arch == \"$_\""} @tmpr) . ")"; push(@requirements, $r); } elsif (defined($condor_arch)) { my $r = "(" . join(" || ", map { "Arch == \"$_\"" } split(/\s+/, $condor_arch)) . ")"; push(@requirements, $r); } if($description->min_memory() ne '') { push(@requirements, " Memory >= " . $description->min_memory()); } if (scalar(@requirements) > 0) { $rc = print SCRIPT_FILE "Requirements = ", join(" && ", @requirements) ."\n"; } if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } if ($accounting_groups_callout && $group) { $name = getpwuid($>); $rc = print SCRIPT_FILE "+AccountingGroup = \"$group.$name\"\n" if $group; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } if($rank ne '') { $rc = print SCRIPT_FILE "$rank\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } if ($ENV{X509_USER_PROXY} ne "") { $rc = print SCRIPT_FILE "X509UserProxy = $ENV{X509_USER_PROXY}\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } $rc = print SCRIPT_FILE "Environment = $environment_string\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "Arguments = $argument_string\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "InitialDir = " . $description->directory() . "\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "Input = " . $description->stdin() . "\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "Log = " . $self->{condor_logfile} . "\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "log_xml = True\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } # NFS Lite mode if ($isNFSLite && !$isManagedFork) { print SCRIPT_FILE "should_transfer_files = YES\n"; print SCRIPT_FILE "when_to_transfer_output = ON_EXIT\n"; print SCRIPT_FILE "transfer_output = true\n"; # GRAM Files to transfer to the worker node # Only do this if we are dealing with a GRAM job that has set up a scratch area # otherwise we assume it is a globus-job-run or the users is using remote_initialdir if ( $scratch_isset ) { my $sdir; my @flist; opendir($sdir,$scratch_directory); my @sfiles = grep { !/^\./} readdir($sdir); close $sdir; print SCRIPT_FILE "transfer_input_files = "; SFILE: foreach $f ( @sfiles ) { $f =~ s{\/\/}{\/}g; $f = $scratch_directory . "/" . $f; next SFILE if $f eq $description->executable(); next SFILE if $f eq $description->stdin(); next SFILE if $f eq $description->stdout(); push (@flist,"$f"); } print SCRIPT_FILE join(",",@flist); print SCRIPT_FILE "\n"; } } # End NFS Lite Mode $rc = print SCRIPT_FILE "#Extra attributes specified by client\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "$submit_attrs_string\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $rc = print SCRIPT_FILE "X509UserProxy = $ENV{X509_USER_PROXY}\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } # default max_wall_time can be specified in globus-gram-job-manager.rvf if($description->max_wall_time() ne '') { my $max_wall_time = $description->max_wall_time() ; $rc = print SCRIPT_FILE "PeriodicRemove= (JobStatus == 2) && ( (time() - EnteredCurrentStatus) > (" . $max_wall_time . " * 60))\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } my $shouldtransferfiles = $description->shouldtransferfiles(); if (defined($shouldtransferfiles)) { $self->log("Adding \"should_transfer_files = $shouldtransferfiles\"\n"); $rc = print SCRIPT_FILE "should_transfer_files = $shouldtransferfiles\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } my @xcount = $description->xcount(); if(@xcount) { $self->log("xcount = " . scalar(@xcount)); foreach my $this_xcount (@xcount) { $self->log("xcount = " . $this_xcount); $rc = print SCRIPT_FILE "request_cpus=$this_xcount \n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } } if($description->min_memory() ne '') { my $memory_request = $description->min_memory(); $rc = print SCRIPT_FILE "request_memory=" . $memory_request . "\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } my $WhenToTransferOutput = $description->whentotransferoutput(); if (defined($WhenToTransferOutput)) { $self->log("Adding \"WhenToTransferOutput = $WhenToTransferOutput\"\n"); $rc = print SCRIPT_FILE "WhenToTransferOutput = $WhenToTransferOutput\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } my $transfer_input_files = $description->transferinputfiles(); if (defined($transfer_input_files)) { $self->log("Adding explicitly \"transfer_input_files = " ."$transfer_input_files\"\n"); $rc = print SCRIPT_FILE "transfer_input_files = $transfer_input_files\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } else { my @transfer_input_files = $description->transferinputfiles(); if (defined($transfer_input_files[0])) { my $file_list_string = ""; foreach my $file (@transfer_input_files) { $file_list_string .= "$file, "; } $file_list_string =~ s/, $//; $self->log("Adding \"transfer_input_files = $file_list_string\"\n"); $rc = print SCRIPT_FILE "transfer_input_files = $file_list_string\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } } my $transfer_output_files = $description->transferoutputfiles(); if (defined($transfer_output_files)) { $self->log("Adding explicitly \"transfer_output_files = " ."$transfer_output_files\"\n"); $rc = print SCRIPT_FILE "transfer_output_files = $transfer_output_files\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } else { my @transfer_output_files = $description->transferoutputfiles(); if (defined($transfer_output_files[0])) { my $file_list_string = ""; foreach my $file (@transfer_output_files) { $file_list_string .= "$file, "; } $file_list_string =~ s/, $//; $self->log("Adding \"transfer_output_files = " ."$file_list_string\"\n"); $rc = print SCRIPT_FILE "transfer_output_files = $file_list_string\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } } if ($universe eq 'parallel') { $rc = print SCRIPT_FILE "Output = " . $description->stdout() . "\n" . "Error = " . $description->stderr() . "\n" . "machine_count = " . $description->count() . "\n" . "queue\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } else { for (my $i = 0; $i < $description->count(); $i++) { if ($multi_output) { $rc = print SCRIPT_FILE "Output = " . $self->{STDIO_MERGER}->add_file('out') . "\n" . "Error = " . $self->{STDIO_MERGER}->add_file('err') . "\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } else { $rc = print SCRIPT_FILE "Output = " . $description->stdout() . "\n" . "Error = " . $description->stderr() . "\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } $rc = print SCRIPT_FILE "queue 1\n"; if (!$rc) { return $self->respond_with_failure_extension( "print: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } } } $rc = close(SCRIPT_FILE); if (!$rc) { return $self->respond_with_failure_extension( "close: $script_filename: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } $self->log("About to submit condor job"); local(*SUBMIT_IN); local(*SUBMIT_OUT); local(*SUBMIT_ERR); $pid = IPC::Open3::open3( \*SUBMIT_IN, \*SUBMIT_OUT, \*SUBMIT_ERR, $condor_submit, $script_filename); if (!$pid) { return $self->respond_with_failure_extension( "open3: $condor_submit: $!", Globus::GRAM::Error::TEMP_SCRIPT_FILE_FAILED()); } close(SUBMIT_IN); local $/; $condor_submit_out = ; $condor_submit_err = ; close(SUBMIT_OUT); close(SUBMIT_ERR); waitpid($pid, 0); $status = $?>>8; $self->log("condor_submit status: $status"); $self->log("condor_submit output: $condor_submit_out"); $self->log("condor_submit error: $condor_submit_err"); if ($status == 0) { $response_line = (grep(/submitted to cluster/, split(/\n/, $condor_submit_out)))[0]; $job_id = (split(/\./, (split(/\s+/, $response_line))[5]))[0]; if($job_id ne '') { $status = Globus::GRAM::JobState::PENDING; $job_id = join(',', map { sprintf("%03d.%03d.%03d", $job_id, $_, 0) } (0..($description->count()-1))); return {JOB_STATE => Globus::GRAM::JobState::PENDING, JOB_ID => $job_id}; } } elsif ($condor_submit_err ne '') { $self->log("Writing extended error information to stderr"); local(*ERR); open(ERR, '>' . $description->stderr()); print ERR $condor_submit_err; close(ERR); $condor_submit_err =~ s/\n/\\n/g; return $self->respond_with_failure_extension( "condor_submit: $condor_submit_err", Globus::GRAM::Error::JOB_EXECUTION_FAILED()); } return Globus::GRAM::Error::JOB_EXECUTION_FAILED; } sub poll { my $self = shift; my $description = $self->{JobDescription}; my $state; my $job_id = $description->job_id(); my @job_ids = split(/,/, $description->job_id()); my ($cluster, $rest) = split(/\./, $job_ids[0], 2); my $num_done; my $num_run; my $num_evict; my $num_abort; my $record = {}; local(*CONDOR_LOG_FILE); $self->log("polling job " . $description->jobid()); if ( open(CONDOR_LOG_FILE, '<' . $self->{condor_logfile}) ) { while () { if (//) { if (defined($record)) { if ($record->{Cluster} == $cluster) { # record Matches our job id if ($record->{EventTypeNumber} == 1) { # execute event $num_run++; } elsif ($record->{EventTypeNumber} == 4) { $num_evict++; } elsif ($record->{EventTypeNumber} == 5) { $num_done++; } elsif ($record->{EventTypeNumber} == 9) { $num_abort++; } } } $record = {}; } elsif (//) { #"/) { my $attr = $1; if (/([^<]+)<\/s>/) { $record->{$attr} = $1; } elsif (/([^<]+)<\/i>/) { $record->{$attr} = int($1); } elsif (//) { $record->{$attr} = ($1 eq 't'); } elsif (/([^<]+)<\/r>/) { $record->{$attr} = $1; } } elsif (/<\/c>/) { } } if (defined($record)) { if ($record->{Cluster} == $cluster) { # record Matches our job id if ($record->{EventTypeNumber} == 1) { # execute event $num_run++; } elsif ($record->{EventTypeNumber} == 4) { $num_evict++; } elsif ($record->{EventTypeNumber} == 5) { $num_done++; } elsif ($record->{EventTypeNumber} == 9) { $num_abort++; } } } @status = grep(/^[0-9]* \(0*${job_id}/, ); close(CONDOR_LOG_FILE); } else { $self->nfssync( $description->stdout(), 0 ) if $description->stdout() ne ''; $self->nfssync( $description->stderr(), 0 ) if $description->stderr() ne ''; return { JOB_STATE => Globus::GRAM::JobState::DONE }; } if($num_abort > 0) { $state = Globus::GRAM::JobState::FAILED; } elsif($num_done == $description->count()) { $self->nfssync( $description->stdout(), 0 ) if $description->stdout() ne ''; $self->nfssync( $description->stderr(), 0 ) if $description->stderr() ne ''; $state = Globus::GRAM::JobState::DONE; } elsif($num_run == 0) { $state = Globus::GRAM::JobState::PENDING; } elsif($num_run > $num_evict) { $state = Globus::GRAM::JobState::ACTIVE; } else { $state = Globus::GRAM::JobState::SUSPENDED; } if($self->{STDIO_MERGER}) { $self->{STDIO_MERGER}->poll($state == Globus::GRAM::JobState::DONE); } return { JOB_STATE => $state }; } sub cancel { my $self = shift; my $description = $self->{JobDescription}; my $job_id = $description->jobid(); my $count = 0; $job_id =~ s/,/ /g; $job_id =~ s/(\d+\.\d+)\.\d+/$1/g; $self->log("cancel job " . $description->jobid()); # we do not need to be too efficient here $self->log(`$condor_rm $job_id 2>&1`); if($? == 0) { return { JOB_STATE => Globus::GRAM::JobState::FAILED }; } else { return Globus::GRAM::Error::JOB_CANCEL_FAILED(); } } sub respond_with_failure_extension { my $self = shift; my $msg = shift; my $rc = shift; $self->respond({GT3_FAILURE_MESSAGE => $msg }); return $rc; } 1; globus_gram_job_manager_condor-2.6/PaxHeaders.22347/dirt.sh0000644000000000000000000000013212756055037020620 xustar0030 mtime=1471699487.036133919 30 atime=1471699510.013133919 30 ctime=1471705059.254133919 globus_gram_job_manager_condor-2.6/dirt.sh0000664000175000017500000000005412756055037021645 0ustar00fedorafedora00000000000000DIRT_TIMESTAMP=1471698757 DIRT_BRANCH_ID=85 globus_gram_job_manager_condor-2.6/PaxHeaders.22347/aclocal.m40000644000000000000000000000013212756067736021173 xustar0030 mtime=1471705054.571133919 30 atime=1471705055.053133919 30 ctime=1471705059.270133919 globus_gram_job_manager_condor-2.6/aclocal.m40000664000175000017500000007014412756067736022227 0ustar00fedorafedora00000000000000# generated automatically by aclocal 1.14.1 -*- Autoconf -*- # Copyright (C) 1996-2013 Free Software Foundation, Inc. # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, # with or without modifications, as long as this notice is preserved. # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY, to the extent permitted by law; without # even the implied warranty of MERCHANTABILITY or FITNESS FOR A # PARTICULAR PURPOSE. m4_ifndef([AC_CONFIG_MACRO_DIRS], [m4_defun([_AM_CONFIG_MACRO_DIRS], [])m4_defun([AC_CONFIG_MACRO_DIRS], [_AM_CONFIG_MACRO_DIRS($@)])]) m4_ifndef([AC_AUTOCONF_VERSION], [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl m4_if(m4_defn([AC_AUTOCONF_VERSION]), [2.69],, [m4_warning([this file was generated for autoconf 2.69. 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ValidWhen: GLOBUS_GRAM_JOB_SUBMIT Attribute: condoros Description: "To use a different condor OpSys than the default for job requirements, add (condor_os = OPSYS..) to the job submit RSL. By default, the globus-condor.conf file will be used if it's defined there, otherwise the condor system default." ValidWhen: GLOBUS_GRAM_JOB_SUBMIT Attribute: condorarch Description: "To use a different condor OpSys than the default for job requirements, add (condor_arch = OPSYS..) to the job submit RSL. By default, the globus-condor.conf file will be used if it's defined there, otherwise the condor system default." ValidWhen: GLOBUS_GRAM_JOB_SUBMIT Attribute: xcount Description: "To specify the number of cores for a job" ValidWhen: GLOBUS_GRAM_JOB_SUBMIT globus_gram_job_manager_condor-2.6/PaxHeaders.22347/Makefile.am0000644000000000000000000000013212756054561021357 xustar0030 mtime=1471699313.004133919 30 atime=1471705052.836133919 30 ctime=1471705059.249133919 globus_gram_job_manager_condor-2.6/Makefile.am0000664000175000017500000000175012756054561022410 0ustar00fedorafedora00000000000000globussysconfdir = ${sysconfdir}/globus gridservicesdir = ${sysconfdir}/grid-services/available validationdir = $(datadir)/globus/globus_gram_job_manager gramperlmoduledir = ${perlmoduledir}/Globus/GRAM/JobManager globussysconf_DATA = globus-condor.conf gridservices_DATA = jobmanager-condor validation_DATA = condor.rvf gramperlmodule_DATA = condor.pm doc_DATA = GLOBUS_LICENSE AT=@ jobmanager-condor: jobmanager-condor.in sed -e "s|$(AT)sbindir$(AT)|$(sbindir)|" \ -e "s|$(AT)sysconfdir$(AT)|$(sysconfdir)|" < $< > $@ # Install link to available file after all other install happens # native packages can remove this and use globus-gatekeeper-admin to deal # with the link install-data-hook: cd $(DESTDIR)$(gridservicesdir)/..; \ [ -L "$(gridservices_DATA)" ] || ln -s available/$(gridservices_DATA) . EXTRA_DIST = \ dirt.sh \ condor.pm \ condor.rvf \ jobmanager-condor.in \ $(doc_DATA) CLEANFILES = jobmanager-condor distuninstallcheck: @: globus_gram_job_manager_condor-2.6/PaxHeaders.22347/GLOBUS_LICENSE0000644000000000000000000000013212756054561021403 xustar0030 mtime=1471699313.004133919 30 atime=1471699313.004133919 30 ctime=1471705059.306133919 globus_gram_job_manager_condor-2.6/GLOBUS_LICENSE0000664000175000017500000002367612756054561022447 0ustar00fedorafedora00000000000000 Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION 1. Definitions. "License" shall mean the terms and conditions for use, reproduction, and distribution as defined by Sections 1 through 9 of this document. "Licensor" shall mean the copyright owner or entity authorized by the copyright owner that is granting the License. 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END OF TERMS AND CONDITIONS globus_gram_job_manager_condor-2.6/PaxHeaders.22347/build-aux0000644000000000000000000000013212756067743021146 xustar0030 mtime=1471705059.289133919 30 atime=1471705059.319133919 30 ctime=1471705059.289133919 globus_gram_job_manager_condor-2.6/build-aux/0000775000175000017500000000000012756067743022251 5ustar00fedorafedora00000000000000globus_gram_job_manager_condor-2.6/build-aux/PaxHeaders.22347/missing0000644000000000000000000000013212756067740022614 xustar0030 mtime=1471705056.908133919 30 atime=1471705057.606133919 30 ctime=1471705059.289133919 globus_gram_job_manager_condor-2.6/build-aux/missing0000755000175000017500000001533012756067740023645 0ustar00fedorafedora00000000000000#! /bin/sh # Common wrapper for a few potentially missing GNU programs. scriptversion=2013-10-28.13; # UTC # Copyright (C) 1996-2013 Free Software Foundation, Inc. # Originally written by Fran,cois Pinard , 1996. # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2, or (at your option) # any later version. # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. 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When coming back to configure, we # need to make the FD available again. if test "$no_create" != yes; then ac_cs_success=: ac_config_status_args= test "$silent" = yes && ac_config_status_args="$ac_config_status_args --quiet" exec 5>/dev/null $SHELL $CONFIG_STATUS $ac_config_status_args || ac_cs_success=false exec 5>>config.log # Use ||, not &&, to avoid exiting from the if with $? = 1, which # would make configure fail if this is the last instruction. $ac_cs_success || as_fn_exit 1 fi if test -n "$ac_unrecognized_opts" && test "$enable_option_checking" != no; then { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: unrecognized options: $ac_unrecognized_opts" >&5 $as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;} fi globus_gram_job_manager_condor-2.6/PaxHeaders.22347/globus-condor.conf.in0000644000000000000000000000013212756054561023354 xustar0030 mtime=1471699313.005133919 30 atime=1471705059.004133919 30 ctime=1471705059.285133919 globus_gram_job_manager_condor-2.6/globus-condor.conf.in0000664000175000017500000000401112756054561024376 0ustar00fedorafedora00000000000000# Condor classified ads contain requirements for processing jobs. Among these # is OpSys, which defines which operating system the job may be run on. Condor # has a reasonable default for this, the operating system of this machine. If # you want to use a different default, specify it here and uncomment it. # condor_os="@CONDOR_OS@" # Condor classified ads contain requirements for processing jobs. Among these # is Arch, which defines which computer architecure the job may be run on. # Condor has a reasonable default for this, the architecture of this machine. # If you want to use a different default, specifiy it here and uncomment it. # condor_arch="@CONDOR_ARCH@" # Path to the condor_submit executable. This is required to submit condor # jobs. condor_submit="@CONDOR_SUBMIT@" # Path to the condor_rm executable. This is required to cancel condor jobs. condor_rm="@CONDOR_RM@" # Value of the CONDOR_CONFIG environment variable. On systems where condor is # installed in non-default location, this variable helps condor find its # configuratino files. If you need to set CONDOR_CONFIG to run condor processes # uncomment the next line at set its value @CONDOR_CONFIG_COND_TRUE@condor_config="@CONDOR_CONFIG@" # The GRAM condor module can perform tests on files used by a condor job # prior to submitting it to condor. These checks include tests on the # files named by the directory, executable, and stdin # RSL attributes to ensure they exist and have suitable permissions. These # checks are done in the condor standard universe always by the GRAM condor # module, but can also be done for "vanilla" universe jobs if desired, @CHECK_VANILLA_FILES_COND_TRUE@check_vanilla_files="@CONDOR_CHECK_VANILLA_FILES@" # Condor supports parallel universe jobs using mpi site-specific scripts which # invoke appropriate mpi commands to start the job. If you want to enable # mpi jobs on condor, you'll need to uncomment the following line and set # it to the path of your mpi script. @CONDOR_MPI_SCRIPT_COND_TRUE@condor_mpi_script="@CONDOR_MPI_SCRIPT@"